- Molecular Tool 'Otx-MO (Imai's 25mer MO)' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Molecular Tool 'Otx-TALEN (Yoshida2017)' >
- Molecular Tool 'Test-MO ' >
- Transcript 'KH2012:KH.C6.71.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C6.71.v2.A.nonSL11-1
Possible name(s)
LEF1; TCF7; TCF7L2
Gene model
Location
KhC6 [117,207 / 141,966]
Amino acid sequence
Length: 678
>KH.C6.71.v2.A.nonSL11-1
RMPQLNSDEAANDEPKTYNDERVGEEDERGWHENDELDNIKGDLVEEEDRDPHRRQSYDV
PAKVNSRHRDSSHRSTDDLDRDLPSDIASSRPNFPYLQQDIGAAIALNQQSLLSSLPSSS
QVPYNPYAYHHFLYGTPSPTDIDGKPGLPRHNDVPAMYPLPGQLGQIPNPLSPWGPTSPT
PFICTASAMAGMLRYPYPFASQFTSTSGGMSAITPFPLVPPHVSGMHSTMIPHPAMALPG
HLPNGHNQSKGGVDKKNFGPEPGSKKREKGDKPSRPYVKKPLNAFMLYMKEQRAKVVAEC
TLKESAAINQILGRKWHSLNREEQQKYYEMARKERQLHQQMFPGWSARDNYGKRKKRKKE
KTQDCTAQNPKKCRAVFGLEQQQLWCAPCRRKKKCIRYQHDDDDDDSDDDSDSIHYQPSP
TDNGGGPPSNFDDPSMTSLSTSSVISSNNGGQSTSSVVGDRFSPNRGHVEIPCDLIKQEK
SPPLSHDNVNKQAHKSARDMYQPSSSYEPSPTDSNHSADRHNCAKRPRTTEPSVASTKSF
TDVQSRHLQSGNTAGKTQTELRNRRSNSFGNSPMPHSHPNNSNNLFSPTVLSPGRSPIGG
LNSPHSNNFFPHFQPYLQMSTLAALPPSPLNSFMGLPGFKGLQSPMSLSGAATTANPGGG
HPGTNSTRRATSALEGKS
Nucleotide sequence
Length: 2,600
>KH2012:KH.C6.71.v2.A.nonSL11-1
GCATAACAGCGCGTACTGGATTACTTGGAGCGAGTCGGAGTAAAGAATGCCTCAGTTAAA
CTCGGATGAAGCTGCCAATGATGAGCCAAAAACCTATAACGATGAAAGGGTAGGCGAAGA
GGACGAACGAGGGTGGCATGAAAATGATGAACTTGACAACATAAAGGGTGATTTAGTCGA
GGAAGAAGACAGAGACCCACACAGGCGACAATCTTACGATGTTCCGGCAAAAGTAAACTC
TCGACACAGAGATTCCAGCCACAGAAGTACAGATGATTTAGACAGAGATCTTCCAAGTGA
TATAGCATCATCACGTCCAAACTTCCCTTATCTTCAGCAAGACATTGGAGCTGCTATTGC
TTTAAACCAGCAGTCGTTGTTGTCGTCTCTACCATCGTCTAGTCAAGTGCCTTATAACCC
TTATGCATATCACCACTTCTTGTATGGTACACCTTCCCCTACAGATATAGATGGGAAACC
AGGTTTACCACGACATAATGATGTACCAGCTATGTACCCACTACCTGGTCAACTTGGTCA
AATACCTAACCCACTTAGTCCATGGGGACCAACTAGCCCAACACCATTCATATGTACTGC
TAGTGCAATGGCTGGCATGTTGCGATATCCATATCCATTTGCATCACAATTTACATCAAC
TTCGGGTGGTATGAGTGCTATAACACCTTTTCCACTGGTGCCCCCTCATGTTAGTGGCAT
GCATTCCACTATGATACCACACCCTGCCATGGCATTACCTGGGCATTTACCTAATGGCCA
CAACCAAAGTAAAGGGGGTGTAGATAAAAAAAATTTTGGGCCTGAACCTGGCTCAAAGAA
ACGCGAAAAAGGCGACAAACCAAGTCGGCCATATGTGAAGAAACCACTCAATGCATTCAT
GCTCTATATGAAGGAACAACGGGCAAAAGTGGTCGCTGAATGCACGCTGAAAGAAAGTGC
GGCAATCAACCAAATACTTGGAAGAAAGTGGCACAGTCTTAACCGTGAAGAGCAACAAAA
ATATTACGAGATGGCTCGAAAAGAACGTCAACTTCACCAACAGATGTTTCCAGGTTGGAG
TGCCAGAGATAATTATGGTAAAAGAAAGAAAAGAAAAAAGGAAAAAACTCAAGATTGCAC
AGCTCAGAACCCCAAGAAATGCCGAGCTGTGTTTGGTCTAGAACAACAGCAATTATGGTG
CGCACCGTGCAGGAGGAAAAAGAAATGCATAAGATACCAACATGATGACGACGATGACGA
TTCAGATGACGATTCGGATTCAATTCATTACCAGCCCTCCCCGACCGACAACGGTGGCGG
TCCCCCCTCAAACTTCGACGACCCCTCTATGACGTCACTATCGACCTCCAGCGTCATAAG
CAGCAACAATGGCGGACAATCAACTTCGTCTGTAGTAGGGGACCGTTTCTCACCTAACAG
GGGGCATGTGGAAATACCTTGTGATTTAATAAAACAAGAAAAGTCGCCACCTTTATCGCA
TGATAATGTTAACAAGCAGGCCCACAAATCAGCGAGAGACATGTACCAACCATCAAGTAG
CTACGAACCTTCCCCTACCGACAGCAACCATAGTGCTGATAGACACAACTGTGCAAAGAG
ACCTCGAACCACAGAACCCAGTGTTGCCAGCACAAAATCTTTTACCGACGTCCAATCGCG
ACATCTTCAATCCGGCAACACTGCAGGAAAAACTCAAACCGAATTGCGTAACCGGCGATC
GAACTCGTTCGGGAATTCCCCGATGCCCCATAGTCACCCCAACAATAGCAATAACCTATT
CTCACCCACCGTACTTTCCCCCGGCCGTTCACCCATTGGGGGTCTGAATTCACCCCACTC
AAACAACTTTTTCCCCCACTTTCAACCGTACCTGCAAATGAGTACACTTGCCGCTTTACC
GCCGTCCCCATTGAACAGTTTCATGGGGCTACCCGGTTTCAAAGGCTTACAGTCACCCAT
GAGTCTAAGTGGGGCAGCAACGACTGCTAACCCCGGTGGGGGGCACCCAGGTACAAATTC
CACCCGCCGTGCAACATCAGCATTAGAAGGAAAATCCTGAAATCTCAGTCGTTTTTTCCG
AGATTCCTCCAAAAACGTAGCGTTGCCAAACACGCAGCATTCTTCAAGTGGGATAAAAAG
AGGGCGTGTCCGGCTTGATGACGTCATTTGTTGTGACGTCACTTGTGATGACGTCACGTC
CAAGTTTTGTGTAGCGACCTTTGCGTGGTGCCAACACCGCATGAATTGCCAACCATACCT
TACTCGTGCCTCGGATTTTTTACGACGTTTAAATCATGTTTTTTTTTTTATCTTTTCTCT
CGTGGAGCATATTATTATAAAACCATCGCAATTTTACTTTTAGCGCAGTGAATATTCGTT
CTCAACTTTTTCTTTTCATTTCATTTCGAACTTGTCTTTTTAAACCCGAGATTGCGGACG
GGCGTTTACTTTTCCGTACCGTTGCTGCTTTGTTTTGACAACTTTTTTGACTCCGGACAC
GTGAAAGTAATGTCACGCATCGTTTTTACTGTTTTTTTTTTACCACGTGGCCTTTTATTC
GTATTGAACAATCCAACAGT
| PANTHER |
TCF/LEF (IPR024940) - T[2-514] 7.7E-118 |
| SUPERFAMILY |
HMG_box_dom_sf (IPR036910) - T[263-345] 5.89E-20 |
| Gene3D |
HMG_box_dom_sf (IPR036910) - T[277-361] 4.1E-23 |
| SMART |
HMG_box_dom (IPR009071) - T[277-347] 2.4E-19 |
| Pfam |
HMG_box_dom (IPR009071) - T[278-345] 2.6E-21 |
| ProSiteProfiles |
HMG_box_dom (IPR009071) - T[278-346] 15.987 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TF7L2_HUMAN | 47.024 % | 229 | 1.69E-66 |
| LEF1_HUMAN | 48.352 % | 188 | 1.83E-53 |
| TF7L1_HUMAN | 44.816 % | 182 | 9.45E-50 |