- Transcript 'KH2012:KH.C6.224.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.224.v1.A.ND1-1
Possible name(s)
GBE1
Gene model
Location
KhC6 [569,562 / 576,409]
Amino acid sequence
Length: 676
>KH.C6.224.v1.A.ND1-1
MSVTEIYQRYGMFEKTKMAIESVEGLERFTQGHKEFGIMMTDNGGVRCMEWVPDVKAVYL
KGEFSNCWELRKFEARNFGKWELYIPPCYDGSCPIQHLSELKLVIETHDNQRLERISPWA
KYVVQRGDDATFKWLFWNTPRNQIQKYTQRPSKPDRLRIYEAHIGIASDRYEVSSYRHFT
RQVLPRIRDLGYNTLLLMALVEHPYYPSFGYQVTNYFAASSRYGTTAELKELIDTAHAMG
IYVIMDIMHGESSKNILDGLNMFDGTEGGFFKQGKEGTNQEHNTRVFDYSKWETVRFLLS
QLRFYLDEFQIDGFRFCGVTEMVYRDMETGRRMTDEYEQYFGTHMNLEAISYLMLMNDML
HKFYPEVTTIAEEMSGLPCITRLVSEGGLGFDYKMAMDIPEKWMKLISNTRDEDWCMEYI
QNFLTNQRPGEKRIAYVENHEQNEASLMTLSRNLIGNSPMSETEQLTISLDRGLSLYKMI
RLLTHAFTGQGYMNFIGNEFGHPDWVELPSPANNDSYKFARRQLYLADNDQLRYKYLKRY
DTAINKLEQNFAWLKSNQSVVTRKHEDDKVFVFERAGLIFVFNFHPTKSYKNYKIPVQNG
GSYNIVLDSDEKFFGGKNRNQQQTNFNTQNGYYENCNNSTMVDMPSRSAFVMSQCNNMPR
EEYQHIITSYHGEFWH
Nucleotide sequence
Length: 2,326
>KH2012:KH.C6.224.v1.A.ND1-1
ATGTCTGTAACAGAAATTTATCAAAGGTATGGAATGTTCGAGAAAACAAAGATGGCGATA
GAAAGCGTTGAAGGATTGGAGCGATTTACGCAAGGCCACAAAGAGTTCGGGATCATGATG
ACTGATAACGGTGGCGTGAGGTGCATGGAGTGGGTACCCGATGTTAAAGCTGTTTATCTT
AAAGGAGAATTCAGTAACTGCTGGGAGCTTAGAAAATTCGAGGCTAGAAATTTCGGTAAA
TGGGAATTGTATATCCCCCCGTGTTACGACGGTAGCTGCCCTATTCAACACTTGAGCGAA
CTGAAGCTTGTAATCGAAACACATGATAACCAACGTCTTGAACGTATTTCACCTTGGGCA
AAGTACGTTGTACAACGTGGAGATGATGCTACGTTTAAATGGCTTTTCTGGAACACACCA
AGAAACCAAATACAAAAGTACACACAAAGACCAAGCAAACCGGACCGCCTTCGAATCTAC
GAAGCTCATATTGGAATTGCGTCTGACCGTTATGAAGTGTCCAGCTACCGACATTTCACA
AGACAAGTGTTGCCACGTATACGAGACCTTGGGTACAACACTCTTCTACTTATGGCGCTT
GTAGAGCACCCATATTACCCAAGTTTCGGATACCAAGTTACCAACTATTTCGCAGCTTCA
AGTCGTTATGGAACAACTGCCGAGTTAAAAGAACTGATCGACACTGCGCATGCGATGGGA
ATTTACGTCATAATGGACATTATGCACGGGGAATCGTCAAAGAACATTCTGGATGGATTG
AATATGTTTGACGGTACAGAAGGCGGGTTCTTTAAACAAGGAAAAGAAGGCACAAACCAA
GAACATAACACAAGGGTGTTTGATTACAGCAAATGGGAAACAGTTCGCTTTCTGCTTTCG
CAACTTCGATTTTACTTGGACGAGTTCCAAATCGACGGCTTCAGATTCTGTGGTGTGACA
GAAATGGTCTACCGAGATATGGAGACAGGCCGACGAATGACAGACGAATACGAACAATAC
TTCGGAACTCATATGAACTTGGAAGCTATTTCATATTTAATGCTAATGAACGATATGCTG
CATAAATTCTACCCCGAAGTTACAACTATTGCCGAGGAAATGAGTGGCTTGCCATGTATT
ACACGGCTTGTAAGCGAAGGTGGGCTTGGATTCGATTACAAAATGGCGATGGATATTCCA
GAAAAATGGATGAAGCTCATTTCCAACACGCGAGACGAGGATTGGTGTATGGAATATATT
CAAAATTTCCTGACCAATCAGAGGCCAGGAGAGAAAAGAATCGCCTACGTGGAAAATCAC
GAGCAGAACGAAGCAAGTCTAATGACACTCAGTCGAAATTTGATCGGGAATTCTCCGATG
TCAGAAACCGAGCAGTTAACTATTTCATTGGACCGTGGACTCAGTTTATACAAAATGATT
CGCCTGCTTACCCATGCTTTTACTGGGCAAGGATACATGAACTTTATAGGAAACGAGTTC
GGGCATCCTGATTGGGTAGAGCTACCCTCGCCTGCAAACAACGACAGTTACAAATTTGCG
AGACGACAGCTCTACCTAGCGGACAACGATCAGCTACGATACAAGTACCTCAAGAGATAC
GATACCGCAATTAATAAATTGGAACAAAACTTTGCTTGGTTGAAGTCCAATCAGAGCGTC
GTAACACGTAAGCACGAGGATGACAAAGTTTTTGTATTCGAACGAGCTGGTCTTATATTT
GTATTCAACTTCCATCCGACTAAAAGCTACAAAAACTACAAGATACCTGTACAAAATGGC
GGAAGCTACAATATTGTTTTGGATTCGGACGAAAAATTCTTCGGTGGCAAAAACCGCAAC
CAGCAACAAACAAATTTCAATACGCAGAATGGATATTACGAAAATTGCAACAACTCCACA
ATGGTGGACATGCCTTCTAGATCCGCTTTTGTGATGTCACAATGCAACAATATGCCACGC
GAAGAATATCAGCATATTATTACGTCATACCATGGCGAATTCTGGCATTAAGTTATTTCC
AACAAAATAAATTTTAGAGTAGAATGTCGTCCTTTAGCTATTCATATCCTTATCATGTAG
TGCCTAAATCATAGGCGCCAAATCTTTTAAAATGCAGGGGATGCAGGAATAGGATACAAA
GCCCTTGGGAACAAATTTTATCTAATTGGTCGTATTTTTATGGTTTTAAACGGTGCAAAA
ATTCCAGGGCTAACTTGCCTACCTTGCCACCCCAGATTTGTCGCCTATGCCTATTATTTT
AATGTCGTTTTGTCAAATTAGATTAAATAAACCATATATTGAAAAA
| PIRSF |
Branching_enzy (IPR037439) - T[4-665] 3.1E-150 |
| PANTHER |
Branching_enzy (IPR037439) - T[4-656] 3.6E-251 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[28-131] 9.8E-11 |
| Gene3D |
Ig-like_fold (IPR013783) - T[31-143] 5.3E-208 |
| Pfam |
Glyco_hydro_13_N (IPR004193) - T[36-120] 1.1E-5 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[146-322] 2.25E-66 - T[349-547] 2.25E-66 |
| SMART |
Glyco_hydro_13_cat_dom (IPR006047) - T[165-544] 7.7E-6 |
| Pfam |
Glyco_hydro_13_cat_dom (IPR006047) - T[184-294] 2.6E-10 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[556-658] 1.9E-33 |
| Pfam |
A-amylase/branching_C (IPR006048) - T[562-652] 1.2E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLGB_HUMAN | 45.758 % | 636 | 0 |
