- Transcript 'KH2012:KH.C6.214.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.214.v1.R.ND1-1
Possible name(s)
ARHGAP1; GDAP2; MACROD1
Gene model
Location
KhC6 [1,556,622 / 1,560,954]
Amino acid sequence
Length: 448
>KH.C6.214.v1.R.ND1-1
LTSVGYRYVMDDRSSDFVERNSHTTLNQLQNWSKLYVNEDNFTGDEENIPDLRFDVRHDL
NDRIYICYDDLSKLEVDAVVLPINDVNLRKSQLARDVTLGAGPEISAVYERYKHNKDMKT
GSVTFETGFALPARFVISVMEPRISLKYQTAVETALHGCYVGAMQCAAEHKLSSVAFPLL
YDPTAEPSLTTHMGHIAIRTIRCCLQKLSCHPKAVVLVLTEKQMDLYSNLLSTYFPRSNT
EASDFIYWLPQTEFTDWGEIVRADRAIRIRDFATENEATSEMSESSHKEDPVIPSTITSH
SFASMSGDHDSRRKRQIENMTKDKMLKSQERIYHRLLRCARTENLSEIASTKALYVCGND
RGGSPVVVLVAKYMNVQNMNMEKALLYFIHILDSVVNERYSLVYFHTVSESKNHPSVEFI
RHVYHTLDQRYRENLKYLYIVHPSFMS+
Nucleotide sequence
Length: 1,344
>KH2012:KH.C6.214.v1.R.ND1-1
ATTGACCTCTGTAGGTTACCGGTACGTTATGGATGATCGTAGTTCTGACTTTGTTGAAAG
AAATTCACATACTACGTTAAACCAACTGCAAAACTGGAGCAAGCTGTACGTAAATGAAGA
TAACTTTACGGGCGACGAAGAAAATATACCGGATTTACGGTTCGACGTTCGCCATGATCT
GAATGATAGAATTTACATATGTTATGACGACTTATCAAAGTTAGAGGTTGATGCTGTTGT
GCTACCAATTAACGATGTCAACCTACGCAAGTCGCAACTTGCCAGAGATGTTACGTTGGG
TGCTGGACCGGAAATAAGTGCAGTTTATGAAAGATACAAACACAATAAAGATATGAAAAC
CGGCTCCGTGACTTTTGAAACTGGCTTTGCATTACCTGCACGATTTGTTATAAGTGTAAT
GGAACCAAGAATATCATTGAAATATCAAACTGCAGTGGAAACTGCTCTACATGGATGCTA
CGTTGGTGCTATGCAATGTGCTGCTGAACACAAGTTGTCTTCAGTAGCGTTTCCATTATT
ATACGATCCAACTGCAGAACCTTCACTCACCACGCATATGGGCCACATAGCCATACGTAC
TATTCGATGCTGTCTTCAGAAACTTTCTTGTCATCCAAAAGCTGTGGTCCTGGTCCTCAC
AGAGAAACAGATGGATTTATACAGTAACCTGCTATCCACGTATTTTCCAAGGAGTAATAC
AGAAGCATCGGATTTTATTTATTGGCTTCCCCAAACAGAGTTTACAGATTGGGGTGAAAT
CGTTCGAGCAGATCGTGCGATACGCATCAGGGATTTTGCAACGGAAAATGAAGCAACGTC
AGAGATGTCTGAGTCATCGCACAAGGAAGACCCCGTCATACCATCCACAATAACGAGCCA
CTCATTCGCAAGTATGTCCGGTGACCACGACAGCAGGAGAAAAAGGCAAATCGAGAACAT
GACGAAAGATAAAATGCTCAAATCACAAGAAAGAATTTACCACCGCCTTTTGAGATGTGC
AAGAACCGAAAATTTATCGGAAATTGCTTCCACCAAGGCCTTGTACGTATGTGGTAACGA
CAGAGGGGGCTCCCCTGTTGTGGTACTGGTAGCAAAATACATGAACGTACAGAATATGAA
CATGGAAAAGGCGCTCCTATATTTTATACACATCCTCGACTCTGTGGTGAACGAAAGGTA
TTCGCTCGTTTATTTTCACACGGTGTCGGAATCTAAAAATCATCCTTCCGTTGAGTTTAT
ACGACATGTGTACCACACGTTAGACCAGCGCTACCGGGAAAATCTCAAGTATCTGTACAT
TGTACACCCAAGCTTCATGAGCAA
| ProSiteProfiles |
Macro_dom (IPR002589) - T[51-235] 12.111 |
| Pfam |
Macro_dom (IPR002589) - T[90-180] 3.4E-9 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[342-447] 1.6E-29 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[343-445] 1.7E-11 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[355-446] 4.2529E-11 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[363-446] 8.7E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GDAP2_HUMAN | 35.128 % | 224 | 5.1E-68 |