- Transcript 'Moocul.CG.ELv1_2.S61...' >
- Molecular Tool 'citb5j13-MO (Hamada's MO)' >
- Molecular Tool 'citb5n20-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C1.1100.v1...' >
- Transcript 'KH2012:KH.C6.198.v2....'
Transcript Model
Transcript Id
KH2012:KH.C6.198.v2.A.SL2-1
Possible name(s)
ADGRB2; HMCN1; THBS1
Gene model
Location
KhC6 [1,145,300 / 1,149,431]
Amino acid sequence
Length: 487
>KH.C6.198.v2.A.SL2-1
QPVPAYDTSLRLSMFSNGNENTPFSPKGYLHHGNAMLVVGGCATAVIPCGTSKTNRDQCS
RFMCCWIPSRRLPSGQACFTSVYNFIKFPFAKWDNWGEWTTCTASACGTGTQTRTRTCID
GQVGQNGCEGSETDTQACQGSCTISWGAWAQWSTCQSAEPTCTSGTRSRSRVCVNQAGVT
QANTACTTGAASESETCNAQLCPAYTQWAGSCSVTCGGGIQNRARTCTTTPTGPIPSSCT
TIAGQACNTQSCNKDLDIMFIVDSSQQLDSCSAKEASLGQVAPFTPAGGLLTTANFPNFV
QQKTFLTSFFSIYKTVVAGRTNVGVLSRSGSCAAATSTNYHKIKALSDTYVPLQAEAAIS
YLCGFPDFFSTLGCGIEYIKTGNTNNPDVIVEILPDITTLSSTLLQVYQNNVASINTIAG
ATRVLTVTAADLSLSSMTQANIDANVLFGKQWACRSTTPPATCIYYLGTVYNPAQVIANF
ILATADL
Nucleotide sequence
Length: 1,728
>KH2012:KH.C6.198.v2.A.SL2-1
GTCAACCAGTGCCTGCCTACGACACCAGTTTAAGACTTAGCATGTTTTCGAATGGTAACG
AAAACACACCGTTCTCACCAAAGGGATATTTACACCACGGCAATGCAATGTTGGTGGTTG
GAGGATGCGCAACTGCAGTCATTCCATGCGGGACATCGAAAACGAACAGAGACCAGTGTA
GCAGATTCATGTGTTGTTGGATTCCAAGCAGGAGGCTACCATCAGGACAAGCTTGCTTTA
CCTCCGTTTACAACTTTATCAAGTTTCCATTTGCAAAGTGGGATAACTGGGGTGAATGGA
CTACATGCACTGCTTCAGCTTGTGGAACTGGAACACAAACCAGAACAAGGACTTGTATTG
ATGGACAAGTTGGACAAAATGGCTGTGAAGGAAGTGAAACTGATACACAAGCATGCCAAG
GTTCTTGTACAATATCATGGGGAGCGTGGGCTCAGTGGTCTACATGCCAAAGTGCTGAGC
CAACTTGCACATCGGGCACAAGGTCCAGATCTCGTGTATGTGTCAACCAAGCTGGTGTCA
CTCAAGCAAATACAGCGTGCACAACAGGTGCTGCATCAGAGAGCGAAACATGCAATGCCC
AATTATGTCCTGCTTATACTCAATGGGCTGGATCTTGCAGTGTAACCTGTGGAGGTGGGA
TCCAAAACCGTGCCCGAACTTGCACAACGACGCCTACAGGACCCATTCCATCATCATGTA
CTACTATTGCTGGACAAGCATGCAACACCCAGAGCTGCAACAAAGACTTAGACATCATGT
TCATTGTGGACTCTTCACAGCAACTTGACTCGTGCTCAGCAAAAGAGGCATCACTTGGAC
AAGTTGCGCCATTTACACCTGCAGGAGGACTTCTAACAACAGCCAATTTCCCCAACTTTG
TTCAACAAAAAACTTTTCTTACTTCGTTTTTCAGCATCTACAAGACTGTAGTTGCTGGCC
GAACTAACGTTGGGGTGTTGTCACGCTCAGGAAGCTGTGCAGCAGCTACTTCTACAAACT
ACCACAAAATTAAAGCACTGAGTGACACATATGTGCCGCTACAGGCTGAAGCAGCTATTT
CTTACCTCTGTGGGTTCCCAGATTTTTTCTCAACCCTTGGTTGTGGTATTGAATACATCA
AAACTGGCAACACTAATAACCCAGATGTTATTGTTGAGATTCTGCCCGATATTACTACCT
TGTCTTCAACTCTTTTACAGGTGTACCAAAATAATGTGGCTTCAATAAACACAATAGCTG
GCGCAACAAGAGTATTGACTGTTACTGCGGCAGATCTTTCGCTATCTTCGATGACGCAGG
CCAACATTGATGCAAATGTACTATTTGGCAAGCAATGGGCATGTAGAAGCACTACACCAC
CAGCAACCTGTATATATTATCTTGGAACTGTATATAATCCAGCACAAGTTATTGCTAACT
TCATCTTAGCAACAGCAGATTTGTAAAAAGTCTAATTTACATTGACTACCCTGCAAAATG
CGGTGTCAGTGAATCATAACCAATTTTTAACTGAGAAGTTAAAAGAAAGAAATGCTTTTG
AACCTACACTAGTGAAAGAGCAACTAAATTTTATCAGCTAAAAAGTTATGCTTACCCTGA
TTGTGTTTGAAAAATAACACTTTTTCTACTTTTTTATTGAATTTGTGCCATTTTTCTTTT
GCTTGTTTGTTTAATTGATTGAATATTTGAATACACCAAAGACTTACC
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[90-139] 9.973 - T[143-203] 11.078 - T[204-253] 8.22 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[91-142] 1.1E-8 - T[143-202] 9.7E-7 - T[204-256] 1.5E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[92-138] 1.15E-8 - T[145-202] 2.22E-6 - T[210-252] 2.35E-5 |
| SMART |
TSP1_rpt (IPR000884) - T[93-143] 1.0E-6 - T[146-203] 2.0E-4 - T[205-253] 0.0062 |
| Pfam |
TSP1_rpt (IPR000884) - T[95-140] 2.1E-6 - T[148-202] 5.2E-5 - T[210-252] 1.8E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 36.872 % | 94.7 | 2.79E-20 |
| AGRB2_HUMAN | 34.32 % | 89.4 | 1.29E-18 |
| TSP1_HUMAN | 36.257 % | 86.7 | 7.51E-18 |