- Transcript 'KH2012:KH.C6.197.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.197.v1.A.ND1-1
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
KhC6 [30,604 / 34,986]
Amino acid sequence
Length: 816
>KH.C6.197.v1.A.ND1-1
EVIMRLLLLGCVFVLSVACAGAQDCNVHQFTMFNQSNPGPPCLKDPCAADSEDVALENCT
LYVHCMLYDNACYAKYKPAQEYSDLTGILEVILSLGNGTTTTSTNTGDGDARLYPIGGTG
GLPNTGLPGGLGSLPGGLGSFPGASQSFPICTPPAVSPGIGGLPGLGGLGGLGGLGGVGG
LPGMGGVGGIGGIGGIGGIGGIGGIGGIGGIGGIGGIGCPSSFPATCNINAQYPSLLLPL
LEAPVNIPYCLRIPCSTSNPCLERNRNACLNVPGCYFDMGLLNLRQRYGNTIMPGVPVCH
LAVRNKKFHQLVGNYVQTSGRQWNGIYTQCFLNENRNEIYAPSPGCYQINVLKYMGVHPQ
VAASWPGMTNNDCYLIDGCPINGVCYRPGQLTRVQVRSGEDAARNNAQTGYNYFGQPMCL
NYNPTTPQEHLDGYHQCRQAGCVVDPSITTNTLKQQLYQIALTLPIHQQIPFWRGVLNNQ
IRADNYKQHMNPSGACLNNVQSPNIAPFSLNVGKRRKRNIFQNLAGSLTGLGGLTSGLPS
SFFPGTTPQCPYQSYQGFLKGSIAGCCQRNYCYTPRSSILRSASGVAAYQAEWGEYSACT
ASCGGGTRKRSRPCVTYRHNDTCVQGVAEETHRCNVDACPQFGNWGGYGSCSLTCGGGTQ
TRTRPCLPEGSTCPDDAQGGASQSRPCNQIACPTYSAWSDFGDCSVACGVGEKTRTRTCT
SPPGAAPCSAASLISTESCAVSCGTCQETEGPCQRFNACYKEITMQCVPDANGGAYCPNC
PNRVSKRRCVPTDGSLNAAYCGYCNWPQVTCLPLTP
Nucleotide sequence
Length: 2,715
>KH2012:KH.C6.197.v1.A.ND1-1
GAATAGACAGAGAGCAAGCTAGAAGAACAGAACGGGCTGGAGGGCCTTATCCCGAAGAGA
AAATTTCTGCTCGATAATGAATTGTTAGATGTAGCGCAGTATAGGCTGTATGATCATCTT
TATTTACAAAAGACCTTTACGAATTGTATTGTAATTTTACAGAGTTAAGAGGTTATAATG
AGGTTACTACTTTTAGGCTGCGTTTTCGTGCTTTCCGTGGCGTGTGCAGGTGCGCAAGAC
TGCAACGTCCATCAATTTACCATGTTCAATCAATCGAACCCTGGCCCTCCTTGTTTAAAA
GACCCATGTGCTGCCGACAGCGAAGATGTGGCCTTGGAAAATTGCACCCTATACGTTCAT
TGCATGTTGTACGACAATGCATGTTATGCTAAATATAAACCAGCACAAGAATACTCTGAC
TTGACTGGAATATTGGAAGTGATCTTAAGCCTCGGCAACGGAACTACAACCACCTCAACA
AACACTGGTGATGGAGACGCCAGGCTTTACCCAATAGGTGGTACAGGCGGTTTACCAAAT
ACTGGCTTGCCCGGGGGCTTAGGTAGTTTACCTGGTGGTCTCGGTAGCTTTCCCGGCGCT
AGTCAGTCTTTCCCAATTTGTACACCACCGGCAGTTTCGCCGGGTATTGGAGGTTTGCCT
GGCCTTGGCGGACTCGGTGGACTAGGCGGTCTTGGTGGAGTTGGTGGGCTACCCGGTATG
GGTGGAGTTGGAGGAATCGGTGGGATTGGCGGAATCGGTGGAATTGGCGGAATCGGCGGG
ATTGGCGGAATCGGTGGGATTGGCGGAATCGGTGGGATTGGATGTCCTTCTTCTTTTCCG
GCAACATGCAATATTAATGCTCAATATCCAAGTTTGCTTCTACCTTTGTTAGAGGCACCA
GTCAATATCCCATATTGCTTAAGAATACCATGCTCCACAAGCAATCCATGCCTTGAAAGA
AATAGAAACGCTTGTCTCAACGTCCCTGGGTGTTATTTCGACATGGGTCTTCTTAATCTA
CGACAACGTTATGGCAATACCATTATGCCCGGTGTACCTGTATGCCATCTTGCAGTCAGA
AACAAGAAGTTTCATCAATTGGTTGGCAACTACGTTCAAACGAGTGGACGACAGTGGAAT
GGCATTTACACTCAATGTTTTCTTAACGAAAATCGAAACGAAATATACGCTCCATCACCC
GGCTGCTATCAAATCAACGTTCTGAAGTACATGGGAGTTCACCCTCAGGTTGCAGCTTCT
TGGCCAGGTATGACAAACAACGATTGCTACCTGATCGACGGTTGTCCAATCAATGGAGTG
TGTTACCGACCTGGTCAGCTCACAAGAGTCCAAGTAAGATCTGGAGAAGACGCAGCTCGT
AATAATGCCCAAACTGGTTACAACTACTTCGGTCAACCGATGTGTCTTAACTACAATCCA
ACAACACCACAAGAACACTTGGACGGTTATCATCAATGCAGGCAAGCTGGTTGTGTGGTT
GACCCATCAATTACTACGAACACGCTGAAGCAACAGCTTTACCAGATTGCATTAACTTTA
CCTATTCACCAACAAATACCTTTCTGGCGTGGTGTGTTGAATAACCAAATAAGAGCCGAT
AACTACAAGCAACACATGAATCCAAGCGGAGCTTGTCTGAACAATGTACAATCTCCAAAC
ATCGCACCATTTTCACTCAATGTGGGCAAGCGGAGAAAGAGGAATATCTTCCAAAACCTT
GCTGGTTCGCTTACTGGTTTGGGTGGTTTGACTAGCGGCCTTCCATCTTCGTTTTTCCCT
GGAACTACACCACAGTGCCCGTACCAAAGTTATCAGGGCTTTTTAAAAGGAAGCATTGCC
GGATGCTGTCAACGAAACTATTGCTACACCCCCAGGTCAAGCATCTTAAGGTCGGCTTCA
GGAGTTGCCGCTTATCAGGCTGAGTGGGGAGAATACAGCGCGTGTACTGCCAGTTGTGGT
GGTGGGACACGGAAGAGAAGCAGACCATGTGTGACCTACAGACACAACGACACTTGCGTA
CAAGGAGTGGCTGAAGAAACCCACCGATGCAATGTAGATGCTTGTCCTCAGTTTGGAAAC
TGGGGAGGGTATGGTAGTTGCTCTCTTACTTGTGGAGGTGGAACACAAACCAGAACCCGA
CCTTGCTTACCTGAAGGTAGCACCTGTCCAGATGACGCTCAAGGAGGAGCTTCTCAATCA
CGACCTTGCAACCAAATTGCATGCCCAACCTATTCTGCTTGGAGTGACTTTGGAGACTGT
AGTGTTGCATGTGGCGTTGGAGAGAAAACACGGACAAGAACATGTACATCACCACCTGGA
GCCGCACCATGTAGCGCAGCGTCTTTGATTTCCACAGAATCGTGCGCCGTTAGTTGTGGG
ACATGCCAGGAAACGGAAGGCCCGTGTCAAAGATTCAACGCATGTTACAAGGAGATTACA
ATGCAATGTGTGCCAGATGCAAATGGAGGAGCTTATTGTCCTAACTGTCCCAACCGTGTA
TCTAAAAGACGTTGCGTTCCAACTGATGGAAGCCTCAATGCCGCTTACTGCGGTTACTGC
AATTGGCCACAAGTTACTTGTCTTCCTTTAACCCCATAAACACCTTCTTTGCTTTTCATA
CGTTTTCTGACCGTGTAGATTGAAAGGTAGTTACTCTTAAATTTTTACTTGAGAAAATAA
AACAATGTAATATGC
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[587-638] 10.493 - T[639-693] 11.763 - T[695-744] 9.597 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[588-640] 8.2E-10 - T[641-693] 1.8E-8 - T[694-746] 4.4E-9 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[588-639] 5.23E-10 - T[641-692] 1.96E-8 - T[692-739] 1.83E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[590-640] 4.4E-8 - T[642-693] 2.0E-9 - T[695-744] 2.7E-7 |
| Pfam |
TSP1_rpt (IPR000884) - T[592-639] 5.2E-7 - T[643-692] 4.6E-6 - T[696-739] 8.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 38.065 % | 91.3 | 1.48E-18 |
| AGRB2_HUMAN | 36.232 % | 88.6 | 8.29E-18 |
| AGRB3_HUMAN | 37.589 % | 83.2 | 3.25E-16 |
