- Transcript 'KH2012:KH.C3.110.v1....' >
- Molecular Tool 'Ccnb3 mRNA (Treen 2018)' >
- Transcript 'KH2012:KH.C3.110.v1....' >
- Transcript 'KH2012:KH.C6.162.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.162.v1.A.SL1-1
Possible name(s)
FZD10; FZD4; FZD9
Gene model
Location
KhC6 [1,850,703 / 1,863,619]
Amino acid sequence
Length: 605
>KH.C6.162.v1.A.SL1-1
LDMEIRQTSTYFVAFRLVLTALIAAEFVSSNRSYKLPTSKYDRRLPSDPIFDEDDNRCEP
IQIKMCQGLGYNATRMPNRFGQYRQTEAGIELNSYQVLLQYNCSSELPMFLCAAFLPMCE
PGLERTIGPCEGMCLSIKKLCLPALKSFGYPWPEILNCSNFPKDNKQNMMCMTGTHPHVK
DEQPLIRPTKIKRSYCRQPQISLQSNEGCGWRCGYQQGMFSTEDKEFADLWMGVCSGVCF
ISTVFTVLTFLIDASRFRYPERPIILIAMCYNIYSIPYILRLLVGRNNISCQRNTEGEMF
LIKEGLGNTGCTVVFLLSYFFGMASYLWWVILTLTWFLAAGMKWSHEAIERHSSYFHLVA
WSIPSIKIVIILILRHVDGDELTGMCYVGNQDMNALTGFVLAPLFTYLVIGTSFLLAGFF
SLFRIKSYMEKEGSKTDKLERLMVKIGVFSVLHIVPASIVIGCYFYEHAVRRLWAQNRNV
TPSATIYFLRILMQLVIGVFTGFWVWSKKSMQSWRQCSHSVLALSPKHQLKQTIDNRATC
VTSQHKLPDVITPQECIPTHCPHTGHPLFVAMPTSSGGAFSRTYRFEGKIQEPLLLSNNR
VEGIP
Nucleotide sequence
Length: 2,511
>KH2012:KH.C6.162.v1.A.SL1-1
ATCGTAGAGAAAAGAGGACGAGCTGGTTCTATTTAAATACAAAGCAAGTCGAAAGTGTTG
GCAGCCAGTGTATGAAGTAAGGATCAACTGTCTTATAGTAGGTTAAGGTTGTTTGAGTGC
TAAGTAAAATTGTATAATTGGACATGGAGATTAGACAGACATCGACTTATTTTGTTGCTT
TCCGCCTGGTTTTGACGGCCCTGATAGCCGCAGAATTCGTCTCAAGCAACCGATCTTACA
AACTGCCAACAAGCAAATACGACCGACGGCTACCAAGCGATCCTATTTTCGATGAAGACG
ACAACAGATGCGAGCCTATTCAAATTAAAATGTGCCAAGGACTCGGCTACAACGCAACCC
GAATGCCGAACAGATTCGGCCAATACAGGCAAACTGAAGCCGGGATAGAACTAAACTCCT
ACCAAGTTCTTCTACAATATAATTGCTCCAGTGAGCTACCGATGTTCCTTTGTGCTGCAT
TTTTACCAATGTGCGAGCCCGGGTTAGAACGCACTATAGGCCCTTGCGAAGGAATGTGTC
TTTCCATAAAGAAACTTTGCCTACCAGCACTCAAGTCCTTTGGCTATCCATGGCCGGAAA
TACTGAATTGTTCCAATTTTCCGAAAGACAACAAACAGAACATGATGTGTATGACAGGCA
CTCACCCGCATGTGAAAGACGAACAGCCTCTTATTCGACCGACGAAGATAAAACGAAGCT
ATTGCAGACAGCCACAAATAAGCCTCCAATCCAACGAAGGCTGTGGGTGGAGGTGCGGAT
ACCAACAGGGAATGTTCTCAACAGAAGATAAAGAGTTCGCTGATCTATGGATGGGAGTTT
GCTCTGGAGTTTGTTTCATCAGCACTGTCTTCACAGTGCTAACGTTCCTTATAGATGCGT
CCAGGTTCAGGTACCCTGAGAGGCCCATTATCTTAATAGCTATGTGCTACAACATTTACA
GTATACCGTATATACTACGATTGTTGGTTGGGCGAAACAATATTTCCTGCCAGAGAAACA
CAGAAGGGGAAATGTTTCTGATAAAGGAGGGCTTGGGTAACACTGGGTGTACCGTTGTAT
TTCTCTTGTCTTATTTCTTCGGTATGGCTAGTTACTTATGGTGGGTCATCTTGACTTTGA
CTTGGTTCTTGGCAGCAGGAATGAAGTGGTCACACGAGGCGATAGAGAGGCATAGTTCAT
ATTTTCACTTGGTGGCGTGGTCGATCCCATCGATCAAAATCGTCATCATCCTGATATTAC
GTCATGTGGACGGAGACGAATTAACTGGTATGTGTTACGTTGGTAACCAAGATATGAACG
CACTGACTGGCTTTGTTCTGGCTCCACTGTTCACTTATCTGGTTATCGGGACGTCTTTCT
TACTGGCTGGTTTCTTCAGTTTGTTCAGGATAAAATCCTACATGGAAAAAGAAGGGAGTA
AAACCGATAAACTGGAACGGCTAATGGTCAAAATCGGAGTCTTCTCTGTCTTGCATATTG
TGCCTGCGTCGATTGTGATTGGCTGTTATTTTTACGAGCACGCAGTGAGAAGGCTCTGGG
CACAGAATCGAAACGTCACACCAAGTGCTACGATCTATTTTCTCCGGATTCTAATGCAGC
TCGTCATTGGAGTGTTTACAGGATTCTGGGTGTGGTCCAAAAAGAGCATGCAGTCATGGC
GACAATGTTCCCACTCTGTTCTAGCGCTTTCGCCAAAACATCAATTGAAACAAACAATTG
ACAATCGCGCAACCTGTGTTACGTCACAACACAAACTACCCGACGTCATCACCCCTCAAG
AATGCATACCCACACATTGTCCGCATACTGGACACCCTCTTTTTGTCGCAATGCCGACAT
CTAGCGGCGGAGCATTTTCACGCACGTACAGGTTCGAAGGCAAGATACAGGAACCTTTGT
TGTTGAGTAACAATCGGGTTGAAGGTATCCCGTGAAATGTGTTACCAGGAAACTACTTTC
CGTTGCCGCCTGGCGGATTCAAAATATCTTCAAAGATGCAGAAGTTCTTCAAAGTCGCTT
TGCAGTTTTGTTTCTTTCTTCAAGAGTCCAAATGCGAGACAATGCAGTTATAAAACTATT
GACCCGGCAGCATTTATGTAGCCGGTAACAGAAATCAAAGATTTAGAAGCAGTAACCAAA
CATCAGGCTTCTTATAACATTCCGTCATCCATTTTTCGCCTATATTTGTATTTATACTAC
TTATAGTACCGTTTCAGCAGTTTATTCATTTACTTTTACCGTATCTCTTCAATGTTTACA
GCAGTATGACTTTTGTTTGTGTTCGAGACGATTTCTTCAAGTATTATTGTCCTATGCACA
AACCTTTATAAGTTTCTTCGGTGCTAAAACAGCTTAAAACTTCAATTACCATTCAGAAAA
AAAATACGTCTTTCGTTGCCGAAATTGTGAAATCGCTGCCTTTTTGTTTTGTGCCTTGCA
GTGCTTTTGTGTATTCTTTTAAAAATAAATCTTAACATCAAAATCGTGGCC
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[49-173] 4.4E-38 |
| PANTHER |
FZD4 (IPR026551) - T[52-527] 4.3E-200 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[52-527] 4.3E-200 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[53-174] 24.582 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[56-173] 6.15E-38 |
| SMART |
Frizzled_dom (IPR020067) - T[57-176] 1.5E-47 |
| Pfam |
Frizzled_dom (IPR020067) - T[58-165] 8.3E-27 |
| SMART |
Frizzled/Smoothened_TM (IPR000539) - T[218-524] 1.7E-192 |
| Pfam |
Frizzled/Smoothened_TM (IPR000539) - T[219-518] 5.9E-124 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[228-513] 38.48 |
| PRINTS |
Frizzled/Smoothened_TM (IPR000539) - T[231-253] 7.0E-74 - T[259-281] 7.0E-74 - T[313-337] 7.0E-74 - T[356-379] 7.0E-74 - T[401-423] 7.0E-74 - T[442-463] 7.0E-74 - T[486-506] 7.0E-74 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZD9_HUMAN | 42.077 % | 444 | 6.45E-150 |
| FZD10_HUMAN | 46.139 % | 471 | 1.41E-160 |
| FZD4_HUMAN | 55.441 % | 566 | 0 |