- Region 'REG00001466' >
- Molecular Tool 'Ci-fkh -2.6Kb/Xotch' >
- Transcript 'KH2012:KH.C6.129.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.129.v1.A.nonSL8-1
Possible name(s)
NEUROG1; NEUROG2; NEUROG3
Gene model
Location
KhC6 [1,503,080 / 1,504,983]
Amino acid sequence
Length: 415
>KH.C6.129.v1.A.nonSL8-1
FCSCYKMLDFSSNKSEQGYAIFSSVVPTSIGTSGAQKNDGGPAMHSKQGTVAYNVAAGNA
QYTDLGKTSQDVMDLFQKDTVNSNNNNNNNDKTEKPKKKRRRERSPVTINKLKKIRRSKA
NDRERNRMHGLNDALEELRHVLPTYPDETKLTKIETLRFAYNYIWCLSEMLKNGTAGNSF
DAKSAAQEMMSSVLTSSQVGTENFPTAPTAFQNFAPSNDVTATSYQQPGQYYQQYPNQQQ
YRPNRDVMQPTVTSLEIPDDLESIQAPFMSSQSDFVLEQVVTNQANQGNEIFFQNQQIPN
NNNNNNNSNNNNNNVQAVLPSISNSLLARRNISSPMTLPSNGQVQFQAPISPPFSGNSPT
CPSPMYPVAQPNFYMPPTPSDCGSMAGSSPFNSPQKQLPSPDVPYMPNYSMHLLR
Nucleotide sequence
Length: 1,453
>KH2012:KH.C6.129.v1.A.nonSL8-1
TTTTGCTCTTGCTACAAAATGTTGGATTTTTCTTCAAATAAGTCGGAACAAGGTTACGCC
ATATTTTCTTCTGTTGTTCCGACAAGCATTGGGACATCGGGCGCACAAAAAAACGACGGC
GGGCCCGCCATGCATTCGAAGCAGGGGACGGTCGCTTATAACGTCGCAGCCGGGAATGCA
CAATATACTGATTTAGGAAAGACCTCACAAGACGTAATGGATCTCTTCCAAAAAGACACA
GTCAACAGTAACAACAACAACAACAATAACGACAAAACAGAAAAGCCAAAAAAGAAGCGC
AGACGCGAAAGAAGTCCAGTGACAATTAACAAGTTAAAAAAGATTCGACGATCAAAAGCT
AATGACAGAGAACGAAACCGAATGCATGGTCTTAATGACGCACTAGAAGAATTAAGACAT
GTTTTGCCGACCTACCCCGACGAGACCAAATTAACAAAAATCGAAACCTTGCGATTCGCA
TACAATTATATTTGGTGTTTGAGTGAAATGTTAAAAAATGGAACAGCGGGAAATAGTTTT
GATGCAAAATCCGCCGCTCAAGAAATGATGTCATCAGTTCTGACGTCATCTCAAGTAGGC
ACCGAAAACTTCCCAACCGCGCCCACGGCATTTCAAAACTTCGCCCCCTCCAATGACGTC
ACAGCTACGTCATACCAGCAGCCTGGGCAATACTACCAGCAATACCCAAACCAGCAACAA
TATCGACCAAATCGTGACGTCATGCAGCCTACTGTGACGTCACTGGAAATCCCCGACGAC
CTAGAAAGCATCCAAGCTCCTTTTATGTCGTCACAATCTGACTTTGTTCTGGAGCAAGTG
GTCACAAACCAAGCTAACCAAGGAAACGAGATTTTCTTTCAAAATCAACAGATACCAAAC
AACAATAATAACAACAACAACAGCAACAACAACAACAACAATGTTCAAGCAGTTTTGCCG
TCGATTTCGAACTCGTTGTTGGCTAGAAGAAACATCTCGTCTCCAATGACGTTACCCAGC
AATGGACAAGTCCAATTTCAGGCCCCCATTTCACCTCCATTTTCTGGGAATTCCCCGACG
TGCCCCAGCCCCATGTACCCAGTTGCACAGCCCAACTTTTACATGCCGCCGACCCCAAGC
GATTGTGGAAGTATGGCGGGATCGTCGCCCTTCAATAGCCCGCAGAAGCAACTTCCTTCT
CCCGATGTACCATACATGCCAAACTACTCCATGCATTTACTCCGATAAGGAAAATCTATA
AACATTCCCTATTATGGCTTCAAAACGCCAAAATTCATTCTATTTCATTTGTACGCTCTT
TTAGGCGAAATTTTCATTTTCCTTACTGCCTTTTATTACCATTATAAATTGTCCGCCAAA
CGTATCGTGCCAACTTTCTTTTGAATGTTTATTTCTTACACCTGTGTTCTTAAATAGAAC
TTCCCACAAACCT
| PANTHER |
Ngn1 (IPR032653) - T[7-364] 1.2E-97 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[114-178] 2.22E-17 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[115-174] 2.5E-22 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[115-167] 16.526 |
| Pfam |
bHLH_dom (IPR011598) - T[116-164] 4.3E-15 |
| CDD |
bHLH_dom (IPR011598) - T[116-172] 3.06978E-17 |
| SMART |
bHLH_dom (IPR011598) - T[121-173] 1.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NGN3_HUMAN | 60.526 % | 104 | 3.53E-26 |
| NGN1_HUMAN | 64.384 % | 105 | 3.03E-26 |
| NGN2_HUMAN | 55.814 % | 104 | 1.51E-25 |