- Transcript 'Harore.CG.MTP2014.S3...' >
- Molecular Tool 'Mesp>FGFR-DN (Davidson 2006)' >
- Transcript 'KH2012:KH.C6.129.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.129.v1.A.nonSL7-1
Possible name(s)
NEUROG1; NEUROG2; NEUROG3
Gene model
Location
KhC6 [1,503,081 / 1,504,983]
Amino acid sequence
Length: 414
>KH.C6.129.v1.A.nonSL7-1
CSCYKMLDFSSNKSEQGYAIFSSVVPTSIGTSGAQKNDGGPAMHSKQGTVAYNVAAGNAQ
YTDLGKTSQDVMDLFQKDTVNSNNNNNNNDKTEKPKKKRRRERSPVTINKLKKIRRSKAN
DRERNRMHGLNDALEELRHVLPTYPDETKLTKIETLRFAYNYIWCLSEMLKNGTAGNSFD
AKSAAQEMMSSVLTSSQVGTENFPTAPTAFQNFAPSNDVTATSYQQPGQYYQQYPNQQQY
RPNRDVMQPTVTSLEIPDDLESIQAPFMSSQSDFVLEQVVTNQANQGNEIFFQNQQIPNN
NNNNNNSNNNNNNVQAVLPSISNSLLARRNISSPMTLPSNGQVQFQAPISPPFSGNSPTC
PSPMYPVAQPNFYMPPTPSDCGSMAGSSPFNSPQKQLPSPDVPYMPNYSMHLLR
Nucleotide sequence
Length: 1,452
>KH2012:KH.C6.129.v1.A.nonSL7-1
TTTGCTCTTGCTACAAAATGTTGGATTTTTCTTCAAATAAGTCGGAACAAGGTTACGCCA
TATTTTCTTCTGTTGTTCCGACAAGCATTGGGACATCGGGCGCACAAAAAAACGACGGCG
GGCCCGCCATGCATTCGAAGCAGGGGACGGTCGCTTATAACGTCGCAGCCGGGAATGCAC
AATATACTGATTTAGGAAAGACCTCACAAGACGTAATGGATCTCTTCCAAAAAGACACAG
TCAACAGTAACAACAACAACAACAATAACGACAAAACAGAAAAGCCAAAAAAGAAGCGCA
GACGCGAAAGAAGTCCAGTGACAATTAACAAGTTAAAAAAGATTCGACGATCAAAAGCTA
ATGACAGAGAACGAAACCGAATGCATGGTCTTAATGACGCACTAGAAGAATTAAGACATG
TTTTGCCGACCTACCCCGACGAGACCAAATTAACAAAAATCGAAACCTTGCGATTCGCAT
ACAATTATATTTGGTGTTTGAGTGAAATGTTAAAAAATGGAACAGCGGGAAATAGTTTTG
ATGCAAAATCCGCCGCTCAAGAAATGATGTCATCAGTTCTGACGTCATCTCAAGTAGGCA
CCGAAAACTTCCCAACCGCGCCCACGGCATTTCAAAACTTCGCCCCCTCCAATGACGTCA
CAGCTACGTCATACCAGCAGCCTGGGCAATACTACCAGCAATACCCAAACCAGCAACAAT
ATCGACCAAATCGTGACGTCATGCAGCCTACTGTGACGTCACTGGAAATCCCCGACGACC
TAGAAAGCATCCAAGCTCCTTTTATGTCGTCACAATCTGACTTTGTTCTGGAGCAAGTGG
TCACAAACCAAGCTAACCAAGGAAACGAGATTTTCTTTCAAAATCAACAGATACCAAACA
ACAATAATAACAACAACAACAGCAACAACAACAACAACAATGTTCAAGCAGTTTTGCCGT
CGATTTCGAACTCGTTGTTGGCTAGAAGAAACATCTCGTCTCCAATGACGTTACCCAGCA
ATGGACAAGTCCAATTTCAGGCCCCCATTTCACCTCCATTTTCTGGGAATTCCCCGACGT
GCCCCAGCCCCATGTACCCAGTTGCACAGCCCAACTTTTACATGCCGCCGACCCCAAGCG
ATTGTGGAAGTATGGCGGGATCGTCGCCCTTCAATAGCCCGCAGAAGCAACTTCCTTCTC
CCGATGTACCATACATGCCAAACTACTCCATGCATTTACTCCGATAAGGAAAATCTATAA
ACATTCCCTATTATGGCTTCAAAACGCCAAAATTCATTCTATTTCATTTGTACGCTCTTT
TAGGCGAAATTTTCATTTTCCTTACTGCCTTTTATTACCATTATAAATTGTCCGCCAAAC
GTATCGTGCCAACTTTCTTTTGAATGTTTATTTCTTACACCTGTGTTCTTAAATAGAACT
TCCCACAAACCT
| PANTHER |
Ngn1 (IPR032653) - T[6-363] 1.2E-97 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[113-177] 2.22E-17 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[114-173] 2.5E-22 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[114-166] 16.526 |
| CDD |
bHLH_dom (IPR011598) - T[115-171] 3.05657E-17 |
| Pfam |
bHLH_dom (IPR011598) - T[115-163] 4.2E-15 |
| SMART |
bHLH_dom (IPR011598) - T[120-172] 1.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NGN3_HUMAN | 60.526 % | 104 | 3.29E-26 |
| NGN1_HUMAN | 64.384 % | 105 | 2.9E-26 |
| NGN2_HUMAN | 55.814 % | 104 | 1.35E-25 |