- Transcript 'KH2012:KH.C6.128.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.128.v1.A.SL2-1
Possible name(s)
CELF3; CELF5; CELF6
Gene model
Location
KhC6 [144,720 / 157,258]
Amino acid sequence
Length: 558
>KH.C6.128.v1.A.SL2-1
VHFSSKSTSILYLNCLFYIMAMTVHGQYMQHALTPVMSSNVPVAVHHDNSAVTFGGHSFV
YPQVPVLPQHCGSIMSNTHSHPLKETPEKDDDAVKLFIGQVPKNWEEKELRQVFAPFGEI
FELSVLRDKYTGMHKGCAFLTYTQKTSAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGA
EDRKLFVGMLGKRQNEDDVRILFEPFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAM
EALHGSQTMPGASSSLVVKFADTDKERAVRRMQQMAQTYGLISPVPLQIGTYGLPYAQQN
VVPATPGWNSLASPQPAAINGLAPAAATVIQQPTVIHHQHATPMSGVPSTPQSPVAPLTT
LNLLPPPSSATASTPEGVYPIQAYPGTQGVAPRVPEHASTPMSQSPPSIELSQAYAQPQP
YTVVYVPAQSYGAPQYAPTVAPVAQSITANQLQTNALLASSTNAPQKEGPDGCNLFIYHL
PQEFSDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIG
MKRLKVQLKRPKEQSRPY
Nucleotide sequence
Length: 2,601
>KH2012:KH.C6.128.v1.A.SL2-1
ATTTGGAGTCGTGTTTTTAATAAGCTGTGATTTTCTAAGTGCATTTTAGTTCAAAGTCGA
CGAGTATATTATATTTGAATTGCTTGTTCTATATAATGGCAATGACAGTCCATGGACAGT
ACATGCAACATGCTTTAACGCCAGTGATGAGTAGTAACGTACCTGTAGCAGTACACCATG
ATAATTCTGCAGTAACATTCGGTGGTCACAGTTTTGTATACCCCCAAGTTCCCGTACTGC
CACAACACTGCGGTAGCATAATGAGCAACACACATTCTCACCCATTAAAAGAAACGCCGG
AAAAAGACGACGACGCTGTTAAACTGTTTATTGGTCAAGTGCCAAAGAATTGGGAGGAAA
AAGAACTACGTCAAGTGTTTGCACCGTTCGGTGAAATATTCGAACTTTCGGTTTTACGAG
ACAAATATACAGGCATGCATAAAGGCTGTGCTTTTCTTACATATACCCAAAAGACTTCTG
CTATGAACGCACAAAACAGTCTACATGAAAGAAAAACACTTCCGGGGATGAATCATCCTA
TTCAAGTCAAACCAGCAGATACTGTGAGCAAAGGAGCAGAAGATCGAAAATTATTCGTTG
GTATGCTCGGTAAAAGACAGAACGAAGACGACGTGCGCATTTTATTCGAGCCTTTCGGTA
CAATTGAAGAGTGCACTATATTAAGAACTCCAGAAGGTCAAAGCAAAGGCTGTGCGTTTG
TAAAGCTATCGTGTCATCAAGAAGCTAAATCTGCCATGGAAGCTTTGCATGGGAGCCAGA
CTATGCCGGGGGCGTCTTCGAGTCTTGTTGTGAAATTCGCCGACACGGATAAAGAACGAG
CAGTTCGTCGAATGCAACAGATGGCTCAAACCTATGGTCTTATCAGTCCAGTTCCACTGC
AAATAGGCACATATGGTCTACCATATGCACAACAGAACGTGGTGCCAGCCACACCAGGGT
GGAATTCGCTTGCTTCTCCCCAACCTGCTGCTATTAATGGCCTTGCACCTGCCGCTGCTA
CTGTTATACAACAGCCGACTGTGATACATCACCAACACGCTACACCTATGAGCGGGGTCC
CTAGCACCCCCCAAAGCCCCGTAGCCCCCCTAACTACGCTTAACTTGCTCCCGCCCCCAT
CCAGTGCTACTGCCTCGACCCCAGAAGGGGTTTACCCCATTCAGGCCTACCCAGGTACCC
AAGGGGTTGCACCCCGTGTGCCCGAGCATGCCAGCACTCCAATGTCTCAGTCACCACCTT
CGATCGAGTTGTCGCAAGCATACGCTCAACCGCAGCCGTATACAGTGGTATATGTACCTG
CCCAATCGTATGGTGCGCCACAATACGCACCAACTGTAGCACCTGTAGCACAAAGTATTA
CGGCAAACCAACTGCAAACAAATGCCCTGCTCGCCAGTAGCACGAACGCCCCACAAAAAG
AAGGGCCTGATGGTTGCAACTTATTTATCTACCACCTACCACAAGAATTCTCCGACGCTG
ACCTGGCTAACGTTTTCCAACCGTTTGGGAATGTTATATCGGCAAAAGTGTTCATAGACC
GAGCAACCAACCAAAGCAAATGTTTCGGTTTCGTCAGTTTCGATAACGCTATTAGTTCCC
AAGCTGCCATTCAAACCATGAACGGGTTTCAAATCGGGATGAAACGTCTGAAGGTTCAGC
TTAAACGGCCAAAGGAGCAGAGTCGACCGTATTAATATATTCATTTTTGTTTACAAACGT
TGATTTACCTTCGTACACTATGTACATACAACAATCATCTTTTATCTGGCTGCTCTCGAC
TGCCTCTAGCGGATGGGAATCGTGCAATGCTATTTTTATTTGAACTGACTTCAAGCGCCG
AGAAGCATCGAAATTCTGCTGAATTTTACTGAATTTTGTTGCTTCTAGTTCAGTATTTTT
GCGACTTTATTTTTAGTGCTCAATGCAACCGAGATTTTACTTTTGTACATACAACTATCT
AGTTTCTGCTTGAACCGCTGCTTTCTACACCACTTACCACCGTTTTTCGTCTTCAATTGG
TTTTCTAACCTAACGAGATTTCTGAATAATGACGTCATTGCGTATGACGTCACACTGTGC
TCGACTGTGATTACGCAACACATTCCACCAAACGTACTCAATTTTAAAATCAGTTCTAAA
ATGAAATTCCCCATTAATTTCCGAATGAAGTATATAGTTCTCAATTTTTGCTCGTTTTTT
CCTTTTTTGTATTTGCAGTTTTTATCTTTCAAAATCGCGAAGCTATATCACATGTTAAAA
TATTTATTACCCTCATTTTCGTATGCTGCTCTCCACCTATTACTTGAGTCTATTTTTATA
ACTTAAAAGTGTTGACCAAATTTAATTCGATTTTCCAAGCGGCAACACTGGGCATTTTTT
TGAACGCTTGCCATTTTGAACGCTATACGCACTGTGCGTTTCATCGGTACTAGCTTGAAA
ACTCAAATTTTTCACATATCAACACGTGTGCTGCTGTAACGAACTAAATCGTCATTTTAT
TACTTCATACTGACAGGTATTTCTTGGTGCTTCGGACCTGTGTACATAAAAGTGAGAGAA
AAATTACAAGAATTAAGAGCA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[74-175] 8.6E-21 - T[182-273] 8.88E-41 - T[470-554] 8.88E-41 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[81-178] 7.2E-25 - T[179-270] 9.5E-26 - T[439-550] 9.0E-28 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[89-175] 4.7022E-55 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[94-175] 15.255 - T[183-263] 15.579 - T[473-551] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[95-171] 1.1E-18 - T[184-259] 3.6E-17 - T[474-547] 1.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[96-163] 7.6E-14 - T[185-247] 8.8E-13 - T[475-545] 2.0E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF6_HUMAN | 51.134 % | 433 | 1.21E-147 |
| CELF5_HUMAN | 50.707 % | 452 | 5.78E-155 |
| CELF3_HUMAN | 53.402 % | 470 | 2.08E-162 |
