- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C2.1098.v1...' >
- Transcript 'KH2012:KH.C6.1.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.C6.1.v1.A.SL2-1
Possible name(s)
BOP1; PAFAH1B1; TBL1Y
Gene model
Location
KhC6 [1,059,171 / 1,066,932]
Amino acid sequence
Length: 771
>KH.C6.1.v1.A.SL2-1
INLRLLHKTTSMKKKRPLSELQTSILGENEENLFTNKPIEEEESENEEENEENVAEESES
DYSGLGEDEDSDSDDSMLGEEDSDVEEGEEVNEKSTEPTQHTEEKKETSEVVAKINEKLE
KQTEDNDNDTSDEEDSRNTVGNIPMQWYEDFPHIGYDLDGKKIAKPIRNNDELDKFLDKM
DNPEYWKTIHDKTTGRDHVLTEEELSLVNRVQRGYFYDAKYDPHEPYVDFFTNEKMLHPI
NNAPAHKRSFTPSLVEKRKVGKLVHAIKMGWLKVGKPKQDDEEQIKFYDLWADVNDDKKS
HSELARQKMHIPAPKPALPGHEASYNPPPEYLPTQEEIDQWKEDDPEDRKFDFIPEKHDA
LRRVPQYPKFIQERFARCLDLYLCPRQRKMKFNVNPDDLIPDLPKPRDLRPFPTVQALCY
RGHQAMVRTISVDTTGQWLASGSDDGVVRIWEVQTARCVRELKIDEKEAIKCISWCPNTS
VCLLAITVDTKIIILNPYIGDRLVAQATDSLLQSYEPNEEEEEQSGSKSEKSNSLIPPWR
SVETGLEYQDGYRLVITHPKAVSKVTWHAKGDYFAATVPNNSNAQVFLHQLTKRRSQNPF
SKCKGAVQSVLFHPNRPFFFVATQQYVRVYNLVKQQLSKKLLSNAKWISSIAIHPGGDNL
IVGSYDCRLSWFDMDLSSKPYRTMRYHKRAIRACCFHRKYPLFASAGDDGSIVVSHGMVY
SDLMQNPLIVPVKVLKGHKVDRNLGVLDCCFHPHQPWIFSSAADNTIRLFS
Nucleotide sequence
Length: 2,540
>KH2012:KH.C6.1.v1.A.SL2-1
ATTAATCTACGTTTGTTACATAAAACTACAAGTATGAAGAAAAAGAGACCACTGAGTGAA
TTACAGACCTCTATACTGGGAGAGAATGAGGAAAACTTATTCACAAATAAGCCCATAGAA
GAAGAAGAGTCAGAGAATGAAGAAGAGAACGAAGAAAATGTGGCAGAAGAGAGCGAGAGC
GATTATTCTGGACTTGGTGAGGATGAGGACTCTGATTCAGATGACTCTATGTTGGGTGAA
GAGGATAGTGATGTAGAAGAAGGGGAAGAAGTGAATGAGAAATCAACAGAGCCAACACAA
CACACAGAAGAAAAAAAGGAAACAAGCGAAGTTGTGGCAAAAATAAATGAAAAACTTGAG
AAACAAACTGAAGATAATGATAATGACACTTCAGATGAGGAGGACAGCAGAAACACAGTT
GGTAACATACCCATGCAATGGTATGAAGACTTTCCTCATATTGGTTATGACTTGGATGGG
AAAAAGATCGCAAAACCAATTCGAAATAACGATGAATTGGATAAATTTCTCGATAAAATG
GACAACCCAGAATACTGGAAAACGATCCATGATAAAACAACAGGGAGAGACCATGTTTTA
ACTGAAGAGGAATTGAGTTTGGTTAACAGAGTACAACGAGGTTATTTCTACGATGCTAAA
TATGACCCTCATGAACCATACGTTGACTTTTTCACCAATGAAAAAATGTTACACCCAATA
AATAACGCCCCTGCTCATAAAAGAAGTTTCACCCCTTCTCTGGTGGAAAAACGAAAAGTT
GGCAAGCTTGTCCATGCTATTAAAATGGGTTGGCTAAAAGTTGGCAAGCCTAAGCAAGAT
GATGAAGAACAAATCAAGTTCTATGATTTATGGGCAGATGTGAATGATGATAAAAAGAGC
CATAGTGAACTTGCGAGACAGAAAATGCACATTCCTGCACCTAAACCAGCACTGCCAGGG
CATGAAGCATCTTATAACCCACCCCCAGAGTATTTGCCAACTCAAGAAGAGATTGACCAA
TGGAAAGAAGACGACCCAGAAGACCGGAAGTTTGATTTCATCCCCGAGAAGCACGATGCA
TTGAGAAGAGTTCCTCAATATCCCAAGTTCATCCAGGAGAGATTCGCCCGATGCCTCGAT
CTTTATCTGTGTCCTCGTCAGAGGAAAATGAAGTTTAACGTGAACCCTGATGACCTTATC
CCTGACCTCCCTAAACCCCGTGACCTTCGACCTTTCCCCACCGTACAAGCTCTGTGTTAC
AGGGGTCATCAAGCCATGGTCCGTACTATATCGGTGGATACTACAGGACAATGGTTGGCA
TCAGGTTCTGACGATGGTGTAGTTAGAATATGGGAAGTACAAACAGCTCGTTGTGTGCGT
GAACTTAAAATAGATGAAAAGGAAGCAATCAAATGTATATCATGGTGTCCTAATACCAGT
GTGTGTCTTCTAGCTATCACAGTTGACACGAAAATTATAATTTTGAACCCCTACATTGGA
GATCGACTGGTTGCCCAGGCAACCGACAGCCTCCTCCAATCATATGAGCCAAATGAGGAG
GAAGAGGAGCAGAGTGGGAGCAAGAGTGAGAAGAGCAATTCCCTCATTCCTCCCTGGAGA
TCTGTAGAAACAGGATTAGAATATCAAGATGGGTACAGGCTTGTTATAACACATCCAAAA
GCAGTATCCAAGGTTACATGGCATGCCAAGGGCGATTACTTTGCAGCCACCGTGCCCAAC
AATTCCAATGCGCAAGTATTCTTGCACCAACTCACTAAAAGAAGGTCTCAGAATCCCTTC
AGTAAATGCAAGGGAGCAGTACAGAGCGTGCTGTTTCATCCGAACCGACCTTTCTTCTTT
GTGGCAACGCAGCAATACGTACGTGTCTACAACTTAGTAAAACAGCAGCTTTCGAAAAAA
CTCTTGTCAAACGCAAAATGGATTTCATCAATTGCCATTCATCCAGGAGGTGATAACTTG
ATCGTTGGGAGTTACGACTGCCGTCTTTCATGGTTTGACATGGACCTATCTTCCAAGCCA
TACCGCACAATGCGTTATCATAAACGCGCTATACGTGCGTGTTGCTTCCATCGAAAATAT
CCACTTTTTGCTTCAGCTGGTGATGATGGGTCAATTGTAGTTAGCCATGGGATGGTATAC
AGTGATTTAATGCAAAATCCGCTAATCGTGCCGGTTAAAGTACTGAAAGGTCACAAAGTA
GATCGTAACCTTGGAGTCCTGGATTGTTGTTTCCATCCTCACCAACCATGGATCTTCTCA
TCCGCAGCAGATAATACGATTCGTCTTTTCTCTTGAGTTTAAAGCTCAACTCTTGGGTTG
TGCTGTATACCTGTTAAAACGCTAGTTTTTCTTGGGTGTCTTAACGCCAAAATCCGTCTT
GAGTGCAAGTTTTTCTTGTGCTTTGCTAAAAAAAGCAAAAAGACGTAATTCTGAAGCGTT
TTTCCACTTTCTAGTGTGACTCGCTTAGTTTTACTGTCTCCTTGTTTAAAAATATTAAAA
GAATTAATCTGCGGTCGGTA
| Hamap |
BOP1/Erb1 (IPR028598) - T[13-771] 47.391 |
| PANTHER |
BOP1/Erb1 (IPR028598) - T[31-771] 0.0 |
| SMART |
BOP1_N_dom (IPR012953) - T[148-413] 1.1E-175 |
| Pfam |
BOP1_N_dom (IPR012953) - T[148-413] 2.9E-106 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[378-497] 1.1E-52 - T[549-771] 1.1E-52 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[403-771] 1.3E-155 |
| SMART |
WD40_repeat (IPR001680) - T[413-452] 8.9E-7 - T[455-496] 4.6 - T[549-590] 170.0 - T[593-631] 31.0 - T[634-673] 0.066 - T[677-716] 0.0011 - T[728-771] 2.7E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[420-451] 3.8E-7 - T[681-713] 0.15 - T[731-770] 1.9E-5 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[420-461] 15.922 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[420-461] 14.424 - T[600-771] 9.599 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[439-453] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BOP1_HUMAN | 55.373 % | 814 | 0 |