- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'KH2012:KH.C6.1.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.C6.1.v1.A.SL1-1
Possible name(s)
BOP1; PAFAH1B1; TBL1Y
Gene model
Location
KhC6 [1,059,171 / 1,066,942]
Amino acid sequence
Length: 774
>KH.C6.1.v1.A.SL1-1
IYQINLRLLHKTTSMKKKRPLSELQTSILGENEENLFTNKPIEEEESENEEENEENVAEE
SESDYSGLGEDEDSDSDDSMLGEEDSDVEEGEEVNEKSTEPTQHTEEKKETSEVVAKINE
KLEKQTEDNDNDTSDEEDSRNTVGNIPMQWYEDFPHIGYDLDGKKIAKPIRNNDELDKFL
DKMDNPEYWKTIHDKTTGRDHVLTEEELSLVNRVQRGYFYDAKYDPHEPYVDFFTNEKML
HPINNAPAHKRSFTPSLVEKRKVGKLVHAIKMGWLKVGKPKQDDEEQIKFYDLWADVNDD
KKSHSELARQKMHIPAPKPALPGHEASYNPPPEYLPTQEEIDQWKEDDPEDRKFDFIPEK
HDALRRVPQYPKFIQERFARCLDLYLCPRQRKMKFNVNPDDLIPDLPKPRDLRPFPTVQA
LCYRGHQAMVRTISVDTTGQWLASGSDDGVVRIWEVQTARCVRELKIDEKEAIKCISWCP
NTSVCLLAITVDTKIIILNPYIGDRLVAQATDSLLQSYEPNEEEEEQSGSKSEKSNSLIP
PWRSVETGLEYQDGYRLVITHPKAVSKVTWHAKGDYFAATVPNNSNAQVFLHQLTKRRSQ
NPFSKCKGAVQSVLFHPNRPFFFVATQQYVRVYNLVKQQLSKKLLSNAKWISSIAIHPGG
DNLIVGSYDCRLSWFDMDLSSKPYRTMRYHKRAIRACCFHRKYPLFASAGDDGSIVVSHG
MVYSDLMQNPLIVPVKVLKGHKVDRNLGVLDCCFHPHQPWIFSSAADNTIRLFS
Nucleotide sequence
Length: 2,550
>KH2012:KH.C6.1.v1.A.SL1-1
TATTTACCAGATTAATCTACGTTTGTTACATAAAACTACAAGTATGAAGAAAAAGAGACC
ACTGAGTGAATTACAGACCTCTATACTGGGAGAGAATGAGGAAAACTTATTCACAAATAA
GCCCATAGAAGAAGAAGAGTCAGAGAATGAAGAAGAGAACGAAGAAAATGTGGCAGAAGA
GAGCGAGAGCGATTATTCTGGACTTGGTGAGGATGAGGACTCTGATTCAGATGACTCTAT
GTTGGGTGAAGAGGATAGTGATGTAGAAGAAGGGGAAGAAGTGAATGAGAAATCAACAGA
GCCAACACAACACACAGAAGAAAAAAAGGAAACAAGCGAAGTTGTGGCAAAAATAAATGA
AAAACTTGAGAAACAAACTGAAGATAATGATAATGACACTTCAGATGAGGAGGACAGCAG
AAACACAGTTGGTAACATACCCATGCAATGGTATGAAGACTTTCCTCATATTGGTTATGA
CTTGGATGGGAAAAAGATCGCAAAACCAATTCGAAATAACGATGAATTGGATAAATTTCT
CGATAAAATGGACAACCCAGAATACTGGAAAACGATCCATGATAAAACAACAGGGAGAGA
CCATGTTTTAACTGAAGAGGAATTGAGTTTGGTTAACAGAGTACAACGAGGTTATTTCTA
CGATGCTAAATATGACCCTCATGAACCATACGTTGACTTTTTCACCAATGAAAAAATGTT
ACACCCAATAAATAACGCCCCTGCTCATAAAAGAAGTTTCACCCCTTCTCTGGTGGAAAA
ACGAAAAGTTGGCAAGCTTGTCCATGCTATTAAAATGGGTTGGCTAAAAGTTGGCAAGCC
TAAGCAAGATGATGAAGAACAAATCAAGTTCTATGATTTATGGGCAGATGTGAATGATGA
TAAAAAGAGCCATAGTGAACTTGCGAGACAGAAAATGCACATTCCTGCACCTAAACCAGC
ACTGCCAGGGCATGAAGCATCTTATAACCCACCCCCAGAGTATTTGCCAACTCAAGAAGA
GATTGACCAATGGAAAGAAGACGACCCAGAAGACCGGAAGTTTGATTTCATCCCCGAGAA
GCACGATGCATTGAGAAGAGTTCCTCAATATCCCAAGTTCATCCAGGAGAGATTCGCCCG
ATGCCTCGATCTTTATCTGTGTCCTCGTCAGAGGAAAATGAAGTTTAACGTGAACCCTGA
TGACCTTATCCCTGACCTCCCTAAACCCCGTGACCTTCGACCTTTCCCCACCGTACAAGC
TCTGTGTTACAGGGGTCATCAAGCCATGGTCCGTACTATATCGGTGGATACTACAGGACA
ATGGTTGGCATCAGGTTCTGACGATGGTGTAGTTAGAATATGGGAAGTACAAACAGCTCG
TTGTGTGCGTGAACTTAAAATAGATGAAAAGGAAGCAATCAAATGTATATCATGGTGTCC
TAATACCAGTGTGTGTCTTCTAGCTATCACAGTTGACACGAAAATTATAATTTTGAACCC
CTACATTGGAGATCGACTGGTTGCCCAGGCAACCGACAGCCTCCTCCAATCATATGAGCC
AAATGAGGAGGAAGAGGAGCAGAGTGGGAGCAAGAGTGAGAAGAGCAATTCCCTCATTCC
TCCCTGGAGATCTGTAGAAACAGGATTAGAATATCAAGATGGGTACAGGCTTGTTATAAC
ACATCCAAAAGCAGTATCCAAGGTTACATGGCATGCCAAGGGCGATTACTTTGCAGCCAC
CGTGCCCAACAATTCCAATGCGCAAGTATTCTTGCACCAACTCACTAAAAGAAGGTCTCA
GAATCCCTTCAGTAAATGCAAGGGAGCAGTACAGAGCGTGCTGTTTCATCCGAACCGACC
TTTCTTCTTTGTGGCAACGCAGCAATACGTACGTGTCTACAACTTAGTAAAACAGCAGCT
TTCGAAAAAACTCTTGTCAAACGCAAAATGGATTTCATCAATTGCCATTCATCCAGGAGG
TGATAACTTGATCGTTGGGAGTTACGACTGCCGTCTTTCATGGTTTGACATGGACCTATC
TTCCAAGCCATACCGCACAATGCGTTATCATAAACGCGCTATACGTGCGTGTTGCTTCCA
TCGAAAATATCCACTTTTTGCTTCAGCTGGTGATGATGGGTCAATTGTAGTTAGCCATGG
GATGGTATACAGTGATTTAATGCAAAATCCGCTAATCGTGCCGGTTAAAGTACTGAAAGG
TCACAAAGTAGATCGTAACCTTGGAGTCCTGGATTGTTGTTTCCATCCTCACCAACCATG
GATCTTCTCATCCGCAGCAGATAATACGATTCGTCTTTTCTCTTGAGTTTAAAGCTCAAC
TCTTGGGTTGTGCTGTATACCTGTTAAAACGCTAGTTTTTCTTGGGTGTCTTAACGCCAA
AATCCGTCTTGAGTGCAAGTTTTTCTTGTGCTTTGCTAAAAAAAGCAAAAAGACGTAATT
CTGAAGCGTTTTTCCACTTTCTAGTGTGACTCGCTTAGTTTTACTGTCTCCTTGTTTAAA
AATATTAAAAGAATTAATCTGCGGTCGGTA
| Hamap |
BOP1/Erb1 (IPR028598) - T[16-774] 47.391 |
| PANTHER |
BOP1/Erb1 (IPR028598) - T[34-774] 0.0 |
| SMART |
BOP1_N_dom (IPR012953) - T[151-416] 1.1E-175 |
| Pfam |
BOP1_N_dom (IPR012953) - T[151-416] 3.0E-106 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[381-500] 1.11E-52 - T[552-774] 1.11E-52 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[406-774] 1.3E-155 |
| SMART |
WD40_repeat (IPR001680) - T[416-455] 8.9E-7 - T[458-499] 4.6 - T[552-593] 170.0 - T[596-634] 31.0 - T[637-676] 0.066 - T[680-719] 0.0011 - T[731-774] 2.7E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[423-454] 3.8E-7 - T[684-716] 0.15 - T[734-773] 1.9E-5 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[423-464] 15.922 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[423-464] 14.424 - T[603-774] 9.599 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[442-456] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BOP1_HUMAN | 55.373 % | 814 | 0 |