- Transcript 'KH2012:KH.C12.169.v2...' >
- Transcript 'KH2012:KH.C13.183.v1...' >
- Transcript 'KH2012:KH.C5.155.v1....' >
- Transcript 'KH2012:KH.C4.531.v2....' >
- Transcript 'KH2012:KH.C5.81.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.81.v2.A.SL5-1
Possible name(s)
MATR3; RBM20
Gene model
Location
KhC5 [1,950,822 / 1,958,487]
Amino acid sequence
Length: 713
>KH.C5.81.v2.A.SL5-1
EHYIVCDMSRSPPPPAGRPWYTSQPNHSGGAPAIQSSTERRSPDRGPPPPDWYRWQEYYR
GRSPPRNIPPRSHSPNRAPSPDHKRSNSPRNDRSTNQRVPSPRQERPASPRERMPPRPPS
PRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPRSPPDWRRRSPGPY
YRGPPSDWRRSPPHWARRSPPRYGPPRGRSPPRGHWGPPPPEWDRYRGPPPPDRRSPPRW
APSSHSYDKRWPPPPAPAPPKPDAPAPPTQVPAPATTTVSPVPSPQVDANKPEATNKAEE
TLVPPGEEKEEVIENFDLPEYDAEVPLGQKYVIPVSGFFCKICHKFYNTESSAKITHCKS
KTHYDKFAKWLSEKKVASITQKRSASVSNTNSNDGEPPNKQVKVEIKMEPQQDEAKYDPT
NPTAVEPAEQKEEIKSLISSVAPGQIRVTVTNTQVNTQNENDSDTKEVDMDEGEQDEDST
MNESSVALLDSTPLVDENSTPVLDDNGENGSINQSSDYDAETDQLITNDVKKDNSDCMEA
TLYNLRKLKVAQLKSNLEKRGIKSTGLKTLLIKRLEKVLLEEAAASENEENNKEEEENDE
IGGGENEDEIVENEAEESRDQILTLKMIESDVEASNKKEHWITERELERELLALEGVKQV
NKLTFEKYKVGKKTVVEWTISVNFDGEMSEDGLFFFMPSHQQLSYKATLENEA
Nucleotide sequence
Length: 2,424
>KH2012:KH.C5.81.v2.A.SL5-1
GAACATTATATTGTTTGTGACATGAGTCGTTCACCACCCCCACCTGCAGGAAGGCCATGG
TATACTTCCCAACCAAACCACAGTGGAGGAGCTCCAGCAATACAAAGTAGTACTGAGCGA
AGATCACCAGATCGAGGTCCTCCACCTCCGGATTGGTACAGGTGGCAGGAATATTACCGA
GGAAGAAGTCCTCCACGAAACATCCCCCCACGAAGTCATTCCCCAAACCGTGCTCCAAGC
CCCGACCACAAACGATCAAATAGCCCCCGTAACGATCGCTCTACAAACCAAAGAGTACCA
AGTCCAAGACAGGAACGACCAGCCAGCCCGAGGGAAAGAATGCCCCCAAGACCCCCAAGC
CCTCGAAGAGAAAGACCCCCAAGTCCTCGAAGAGAAAGACCCCCAAGCCCTCGAAGAGAA
AGACCCCCAAGCCCTCGAAGAGAAAGACCCCCAAGCCCTCGAAGAGAAAGACCCCCAAGT
CCTCGCAGAGAGAGACCACGAAGTCCTCCAGACTGGAGACGAAGATCACCAGGTCCGTAT
TACAGAGGACCCCCTTCCGATTGGCGCAGAAGTCCACCTCATTGGGCCCGAAGAAGTCCT
CCCCGATATGGTCCTCCAAGAGGTCGAAGTCCTCCTCGTGGTCACTGGGGTCCACCTCCT
CCAGAATGGGATCGTTACAGAGGACCACCCCCACCTGATCGTCGTTCACCGCCTCGTTGG
GCTCCTTCATCTCATAGTTATGATAAAAGGTGGCCGCCTCCACCTGCACCAGCTCCCCCT
AAACCGGATGCACCTGCACCACCAACACAAGTCCCTGCCCCAGCAACAACAACAGTATCA
CCAGTTCCATCGCCTCAAGTTGATGCAAATAAACCAGAAGCAACTAACAAGGCAGAAGAA
ACTCTGGTCCCACCAGGTGAAGAAAAAGAGGAAGTTATTGAAAATTTTGACCTTCCTGAA
TATGATGCTGAAGTACCTTTAGGTCAAAAATATGTGATCCCAGTTTCTGGATTCTTTTGC
AAAATCTGCCACAAGTTTTACAATACAGAATCCAGTGCAAAGATCACACATTGCAAATCG
AAAACTCACTATGATAAATTTGCTAAATGGCTATCTGAAAAGAAAGTAGCTTCAATAACC
CAGAAGCGATCTGCCAGTGTTTCCAACACCAATTCTAATGATGGTGAGCCACCGAACAAA
CAAGTTAAAGTGGAAATAAAAATGGAACCACAGCAAGATGAAGCAAAATACGATCCTACC
AACCCAACAGCTGTTGAACCAGCGGAGCAAAAAGAGGAAATAAAATCCTTGATATCATCG
GTTGCACCTGGTCAGATCAGAGTTACAGTGACCAACACACAAGTGAATACTCAGAATGAA
AATGATTCCGACACCAAAGAAGTAGATATGGATGAAGGGGAGCAAGACGAGGATTCTACA
ATGAATGAATCCTCTGTAGCATTATTAGATAGCACGCCACTGGTTGATGAGAATTCCACC
CCTGTGTTAGATGATAATGGTGAAAATGGAAGTATCAACCAGTCAAGTGACTATGATGCT
GAAACTGATCAACTAATCACAAATGATGTTAAAAAGGATAATTCAGACTGCATGGAAGCC
ACTCTTTACAATCTACGTAAGCTGAAAGTGGCGCAGTTGAAATCAAATCTTGAAAAACGT
GGAATTAAATCAACTGGTTTAAAAACTTTGCTCATAAAACGCCTGGAGAAGGTTCTGTTG
GAGGAGGCAGCTGCCTCAGAGAATGAAGAGAATAACAAAGAGGAGGAGGAAAATGATGAG
ATAGGTGGTGGTGAAAATGAAGATGAAATTGTGGAAAATGAAGCTGAGGAAAGCCGAGAC
CAAATATTGACTTTAAAGATGATCGAATCTGATGTGGAAGCCTCGAATAAGAAAGAGCAT
TGGATCACTGAGCGAGAGTTGGAAAGAGAATTATTAGCGTTGGAAGGCGTAAAACAAGTA
AACAAACTTACATTTGAAAAATACAAAGTCGGAAAAAAGACGGTTGTCGAGTGGACTATC
AGTGTAAACTTTGATGGGGAAATGTCGGAAGATGGTTTATTCTTTTTCATGCCGTCTCAT
CAACAACTGTCTTACAAAGCAACATTGGAAAATGAGGCGTGACTTGGTGGTTTACAAATT
CAATGAAATACAATTGTTGTTGGGTTTTGTAATCATTGTTAAAACTTTTGAGTCACTATA
CATAAATGAACACCCAGCGGTTGGGGCTTTTAGTTTGTTTTAGATGTAGTATTTTCCACT
GCACTAAAATACTTACTTGCCAATGTTGTAAGTTAGTTTAAATATCAATGAATTTTTTTA
TGCTCTCTAACACCTAATTTGAGTAATGAAGTTTTGTTGCTGTAATTATTGAACACGAAA
TAATAAAATTGCGTAATCACAATA
| PANTHER |
CIZ1 (IPR026811) - T[71-165] 2.3E-20 - T[296-596] 2.3E-20 |
| SMART |
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[335-370] 2.2E-4 |
| ProSiteProfiles |
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[338-369] 9.494 |
| Gene3D |
SAP_dom_sf (IPR036361) - T[527-592] 6.1E-9 |
| SUPERFAMILY |
SAP_dom_sf (IPR036361) - T[543-579] 8.24E-7 |
| ProSiteProfiles |
SAP_dom (IPR003034) - T[545-579] 10.745 |
| SMART |
SAP_dom (IPR003034) - T[545-579] 2.7E-5 |
| Pfam |
SAP_dom (IPR003034) - T[546-577] 1.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|