- Transcript 'KH2012:KH.C5.81.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.81.v2.A.SL1-1
Possible name(s)
MATR3; RBM20
Gene model
Location
KhC5 [1,950,698 / 1,958,487]
Amino acid sequence
Length: 754
>KH.C5.81.v2.A.SL1-1
YFIYVNLQCKISPNHSVGNRRSDIGKDAHKSSLPYILLEEQEHYIVCDMSRSPPPPAGRP
WYTSQPNHSGGAPAIQSSTERRSPDRGPPPPDWYRWQEYYRGRSPPRNIPPRSHSPNRAP
SPDHKRSNSPRNDRSTNQRVPSPRQERPASPRERMPPRPPSPRRERPPSPRRERPPSPRR
ERPPSPRRERPPSPRRERPPSPRRERPRSPPDWRRRSPGPYYRGPPSDWRRSPPHWARRS
PPRYGPPRGRSPPRGHWGPPPPEWDRYRGPPPPDRRSPPRWAPSSHSYDKRWPPPPAPAP
PKPDAPAPPTQVPAPATTTVSPVPSPQVDANKPEATNKAEETLVPPGEEKEEVIENFDLP
EYDAEVPLGQKYVIPVSGFFCKICHKFYNTESSAKITHCKSKTHYDKFAKWLSEKKVASI
TQKRSASVSNTNSNDGEPPNKQVKVEIKMEPQQDEAKYDPTNPTAVEPAEQKEEIKSLIS
SVAPGQIRVTVTNTQVNTQNENDSDTKEVDMDEGEQDEDSTMNESSVALLDSTPLVDENS
TPVLDDNGENGSINQSSDYDAETDQLITNDVKKDNSDCMEATLYNLRKLKVAQLKSNLEK
RGIKSTGLKTLLIKRLEKVLLEEAAASENEENNKEEEENDEIGGGENEDEIVENEAEESR
DQILTLKMIESDVEASNKKEHWITERELERELLALEGVKQVNKLTFEKYKVGKKTVVEWT
ISVNFDGEMSEDGLFFFMPSHQQLSYKATLENEA
Nucleotide sequence
Length: 2,548
>KH2012:KH.C5.81.v2.A.SL1-1
TTATTTCATATATGTAAACTTACAATGTAAAATTTCACCGAATCACTCAGTTGGGAACCG
CAGATCAGATATAGGCAAAGACGCACATAAAAGTAGTTTGCCTTATATATTATTGGAGGA
ACAGGAACATTATATTGTTTGTGACATGAGTCGTTCACCACCCCCACCTGCAGGAAGGCC
ATGGTATACTTCCCAACCAAACCACAGTGGAGGAGCTCCAGCAATACAAAGTAGTACTGA
GCGAAGATCACCAGATCGAGGTCCTCCACCTCCGGATTGGTACAGGTGGCAGGAATATTA
CCGAGGAAGAAGTCCTCCACGAAACATCCCCCCACGAAGTCATTCCCCAAACCGTGCTCC
AAGCCCCGACCACAAACGATCAAATAGCCCCCGTAACGATCGCTCTACAAACCAAAGAGT
ACCAAGTCCAAGACAGGAACGACCAGCCAGCCCGAGGGAAAGAATGCCCCCAAGACCCCC
AAGCCCTCGAAGAGAAAGACCCCCAAGTCCTCGAAGAGAAAGACCCCCAAGCCCTCGAAG
AGAAAGACCCCCAAGCCCTCGAAGAGAAAGACCCCCAAGCCCTCGAAGAGAAAGACCCCC
AAGTCCTCGCAGAGAGAGACCACGAAGTCCTCCAGACTGGAGACGAAGATCACCAGGTCC
GTATTACAGAGGACCCCCTTCCGATTGGCGCAGAAGTCCACCTCATTGGGCCCGAAGAAG
TCCTCCCCGATATGGTCCTCCAAGAGGTCGAAGTCCTCCTCGTGGTCACTGGGGTCCACC
TCCTCCAGAATGGGATCGTTACAGAGGACCACCCCCACCTGATCGTCGTTCACCGCCTCG
TTGGGCTCCTTCATCTCATAGTTATGATAAAAGGTGGCCGCCTCCACCTGCACCAGCTCC
CCCTAAACCGGATGCACCTGCACCACCAACACAAGTCCCTGCCCCAGCAACAACAACAGT
ATCACCAGTTCCATCGCCTCAAGTTGATGCAAATAAACCAGAAGCAACTAACAAGGCAGA
AGAAACTCTGGTCCCACCAGGTGAAGAAAAAGAGGAAGTTATTGAAAATTTTGACCTTCC
TGAATATGATGCTGAAGTACCTTTAGGTCAAAAATATGTGATCCCAGTTTCTGGATTCTT
TTGCAAAATCTGCCACAAGTTTTACAATACAGAATCCAGTGCAAAGATCACACATTGCAA
ATCGAAAACTCACTATGATAAATTTGCTAAATGGCTATCTGAAAAGAAAGTAGCTTCAAT
AACCCAGAAGCGATCTGCCAGTGTTTCCAACACCAATTCTAATGATGGTGAGCCACCGAA
CAAACAAGTTAAAGTGGAAATAAAAATGGAACCACAGCAAGATGAAGCAAAATACGATCC
TACCAACCCAACAGCTGTTGAACCAGCGGAGCAAAAAGAGGAAATAAAATCCTTGATATC
ATCGGTTGCACCTGGTCAGATCAGAGTTACAGTGACCAACACACAAGTGAATACTCAGAA
TGAAAATGATTCCGACACCAAAGAAGTAGATATGGATGAAGGGGAGCAAGACGAGGATTC
TACAATGAATGAATCCTCTGTAGCATTATTAGATAGCACGCCACTGGTTGATGAGAATTC
CACCCCTGTGTTAGATGATAATGGTGAAAATGGAAGTATCAACCAGTCAAGTGACTATGA
TGCTGAAACTGATCAACTAATCACAAATGATGTTAAAAAGGATAATTCAGACTGCATGGA
AGCCACTCTTTACAATCTACGTAAGCTGAAAGTGGCGCAGTTGAAATCAAATCTTGAAAA
ACGTGGAATTAAATCAACTGGTTTAAAAACTTTGCTCATAAAACGCCTGGAGAAGGTTCT
GTTGGAGGAGGCAGCTGCCTCAGAGAATGAAGAGAATAACAAAGAGGAGGAGGAAAATGA
TGAGATAGGTGGTGGTGAAAATGAAGATGAAATTGTGGAAAATGAAGCTGAGGAAAGCCG
AGACCAAATATTGACTTTAAAGATGATCGAATCTGATGTGGAAGCCTCGAATAAGAAAGA
GCATTGGATCACTGAGCGAGAGTTGGAAAGAGAATTATTAGCGTTGGAAGGCGTAAAACA
AGTAAACAAACTTACATTTGAAAAATACAAAGTCGGAAAAAAGACGGTTGTCGAGTGGAC
TATCAGTGTAAACTTTGATGGGGAAATGTCGGAAGATGGTTTATTCTTTTTCATGCCGTC
TCATCAACAACTGTCTTACAAAGCAACATTGGAAAATGAGGCGTGACTTGGTGGTTTACA
AATTCAATGAAATACAATTGTTGTTGGGTTTTGTAATCATTGTTAAAACTTTTGAGTCAC
TATACATAAATGAACACCCAGCGGTTGGGGCTTTTAGTTTGTTTTAGATGTAGTATTTTC
CACTGCACTAAAATACTTACTTGCCAATGTTGTAAGTTAGTTTAAATATCAATGAATTTT
TTTATGCTCTCTAACACCTAATTTGAGTAATGAAGTTTTGTTGCTGTAATTATTGAACAC
GAAATAATAAAATTGCGTAATCACAATA
| PANTHER |
CIZ1 (IPR026811) - T[112-206] 3.4E-20 - T[342-637] 3.4E-20 |
| SMART |
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[376-411] 2.2E-4 |
| ProSiteProfiles |
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[379-410] 9.494 |
| Gene3D |
SAP_dom_sf (IPR036361) - T[568-633] 6.6E-9 |
| SUPERFAMILY |
SAP_dom_sf (IPR036361) - T[584-620] 8.79E-7 |
| SMART |
SAP_dom (IPR003034) - T[586-620] 2.7E-5 |
| ProSiteProfiles |
SAP_dom (IPR003034) - T[586-620] 10.745 |
| Pfam |
SAP_dom (IPR003034) - T[587-618] 1.1E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|