- Transcript 'Moocul.CG.ELv1_2.S38...' >
- Transcript 'KH2012:KH.C3.100.v1....' >
- Molecular Tool 'DMRT1>ZicL' >
- Transcript 'KH2012:KH.C5.74.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.74.v1.A.SL1-1
Possible name(s)
FOXG1; FOXI1; FOXL1
Gene model
Location
KhC5 [2,234,892 / 2,245,382]
Amino acid sequence
Length: 1,124
>KH.C5.74.v1.A.SL1-1
AIFQYCVNYLDFKITADAQVPSSKEIEEPILLTQTEYRKENRRRKNGAKPRKIVHTESSS
GESKNKNLDLVLQRVFKNADSEHSKMIDIHETLAISHHQSPKTLGASSTSPGSVGSPSSI
YSSERPEETCQVTRSPEPFVRVRPRSNGSETGPPLYEATVQHGRSSSSEGLISREQTASS
PGKETTKAEISGTNYNHGNMDSAVHGTPSSYSSPTEEMNGVNNPLMLPTMVPSTNSIMSS
SMLPIMAVPEQNSRFAEKQPKQPVIRHERFNGRGIIGTSGSAARLTSTPPPEERSQYKRP
PHTYPALIASAILDSPGHLITLRGIYDYIMNHFPYYKYCHDKSAWQNSIRHNLSLNQCFV
KVPRYENAAKSNYWTMTREGFEEFGNENSFKRRRRRGAALAPISAYKAKKYQNEGKNGGK
TKQAHNESNKHATPAPSEATTVAQQEGVYTLPFPPQLMALNPGAWGTPDNNTGYHPTEDG
KGRKRAGSPGDKDGLKHPRMMVLKQGDGPSLDSSMINKAAWKREGAIPGLLPTTSQQWIN
AAQRSLMASTGMMMPSLQPSVSGENGYSKASGFEDAYNEAPILLDNIEIGSEVTIRYDTS
EIPIHHFRCRFCPYTYVSNGSLLLEQHARLIHQVELTNAKAKAVAAAALAKSQEDRMAAV
TASKPKDTADRMMTLQNMVSGMSPRSVMAAAQSGAQSILAAAQASGNSAAQFPYSGRFAS
GLLDESMIRSLAEQVNNQQQHADATAEHQNGMDAYAYQRQQALNTIQQAASGASAVTPSL
PQEQLRLFYQQLAMQNPFLANSANSAFAAAAANFPRQMPSPDMEQASQLKNLWQYQQKIL
ELSQMKSGQREGSKSPEKRPSSQPENRSQPSATSPCRSPASNPDVDAESKKNIHAWKQCG
RCDFTAKGVHGLDLHYRKAHASSEAVTSSSASYGSDVMPCGRSAPNLELSTTSSSATEKV
SPNSYEMSFRDQQCDSPLTSSAYPTPPLSNSPSYIKKNFTPLDLSGAEKNLVDKNTSSTQ
TSPAASDVKSRTCRHCDVIFGDEMMHALHMSCHDKTDPFKCTICSQKCHEKYYFNVHLLR
GLHQTNNGGQSESSQEVATEVVNREVTEGDARRSRSNSACSDAR
Nucleotide sequence
Length: 3,908
>KH2012:KH.C5.74.v1.A.SL1-1
GCAATTTTTCAGTATTGTGTTAATTATCTGGATTTTAAAATCACAGCGGACGCACAAGTC
CCTTCGAGCAAAGAAATAGAAGAGCCAATTTTGCTTACTCAGACCGAGTACAGAAAAGAG
AATCGACGGAGAAAGAACGGCGCTAAACCCCGCAAGATAGTTCACACCGAGTCGAGCTCA
GGCGAGTCGAAAAATAAGAATCTCGACTTAGTCCTTCAGCGAGTTTTTAAGAACGCTGAT
TCTGAACATTCAAAGATGATCGACATTCATGAAACACTGGCGATCTCGCATCACCAGAGT
CCGAAAACGTTGGGAGCATCATCCACCTCTCCGGGATCAGTCGGATCCCCCAGCAGTATA
TACAGTAGTGAGCGACCTGAAGAAACATGCCAGGTGACCAGGAGCCCTGAACCTTTTGTC
AGAGTCCGACCACGGAGCAACGGATCGGAAACAGGACCTCCCCTCTATGAAGCAACAGTT
CAACACGGTCGTTCCTCCTCCAGTGAAGGCCTCATTTCCAGAGAGCAGACAGCCAGCTCT
CCTGGCAAAGAAACAACAAAAGCGGAAATATCTGGGACAAATTACAACCACGGAAACATG
GATTCGGCGGTTCATGGCACTCCATCAAGCTATTCAAGCCCCACTGAGGAAATGAACGGA
GTAAACAATCCCCTCATGCTACCGACGATGGTGCCATCCACCAATTCAATCATGTCTTCG
TCCATGTTACCCATCATGGCGGTTCCCGAACAAAACAGTCGTTTCGCCGAAAAACAGCCG
AAACAGCCGGTTATTAGGCACGAGCGTTTCAACGGTCGCGGTATTATCGGTACCAGTGGT
TCCGCAGCTCGTTTAACCAGTACCCCTCCGCCAGAAGAGAGGTCCCAATACAAAAGGCCC
CCACACACATACCCCGCATTAATTGCATCAGCTATTTTGGACAGTCCCGGGCATCTAATT
ACCCTACGCGGTATCTACGACTACATCATGAACCACTTTCCCTACTACAAGTACTGCCAC
GATAAGTCGGCATGGCAGAACTCAATCCGTCACAATCTCAGTCTCAACCAGTGCTTTGTA
AAAGTTCCGAGGTACGAGAACGCGGCCAAGTCAAATTATTGGACCATGACGAGAGAGGGC
TTCGAGGAGTTCGGCAACGAGAACAGTTTCAAAAGGAGACGAAGACGAGGAGCAGCACTT
GCGCCCATTTCCGCATACAAAGCTAAAAAATACCAAAACGAAGGCAAGAACGGCGGGAAA
ACAAAACAGGCCCACAACGAATCGAACAAGCACGCTACGCCAGCACCGTCAGAGGCCACC
ACAGTGGCACAACAAGAAGGGGTGTACACGCTACCCTTCCCACCCCAGCTTATGGCGCTG
AACCCTGGGGCTTGGGGCACACCTGATAACAATACGGGGTACCACCCTACTGAAGACGGC
AAGGGCCGAAAACGAGCAGGAAGCCCTGGAGATAAAGATGGTTTAAAACACCCTAGGATG
ATGGTGCTTAAACAGGGTGATGGTCCAAGCTTAGATTCGTCCATGATCAACAAAGCTGCA
TGGAAGCGAGAAGGAGCTATCCCTGGTTTGCTACCAACCACCTCTCAGCAATGGATAAAC
GCTGCACAAAGGAGCTTAATGGCATCCACCGGTATGATGATGCCTTCACTTCAGCCCAGT
GTCTCTGGTGAGAACGGTTACTCTAAAGCCTCCGGGTTCGAGGACGCGTATAACGAAGCG
CCCATCCTACTCGATAATATTGAGATTGGCAGCGAAGTGACGATCAGGTACGATACCAGC
GAAATTCCGATCCACCATTTCAGATGTCGTTTCTGTCCATACACTTACGTCAGCAACGGT
TCGCTTCTATTGGAGCAACACGCGAGGCTCATCCATCAGGTGGAGCTTACCAACGCAAAG
GCAAAGGCTGTGGCGGCAGCGGCGCTCGCAAAATCTCAAGAAGACCGAATGGCTGCCGTT
ACTGCATCAAAGCCTAAAGATACGGCCGACAGGATGATGACCCTACAGAACATGGTATCT
GGCATGTCGCCGAGATCAGTGATGGCCGCCGCCCAGTCAGGCGCTCAAAGTATTTTGGCG
GCTGCTCAGGCTTCAGGCAACTCCGCTGCTCAGTTTCCATACTCCGGTCGATTCGCCAGC
GGGCTCTTGGACGAGTCTATGATCCGATCATTGGCCGAGCAAGTAAACAACCAACAGCAA
CATGCCGATGCGACCGCAGAACACCAGAATGGAATGGACGCTTATGCTTATCAGCGACAA
CAAGCACTCAACACGATCCAGCAAGCAGCTTCTGGTGCTTCGGCTGTTACACCGAGTCTG
CCGCAAGAACAACTTCGACTTTTCTACCAACAACTAGCAATGCAGAATCCTTTCCTCGCC
AACTCAGCAAATTCAGCATTTGCTGCTGCGGCTGCAAATTTCCCCAGGCAGATGCCTTCG
CCTGATATGGAGCAAGCCTCCCAGCTTAAAAACCTTTGGCAGTATCAGCAAAAAATCCTC
GAGCTTTCACAGATGAAGTCTGGGCAAAGGGAAGGGTCGAAATCGCCGGAAAAGCGACCA
AGTTCACAGCCAGAAAATAGATCTCAGCCAAGCGCTACTTCACCGTGCAGAAGCCCAGCT
TCAAATCCGGATGTCGACGCAGAGTCGAAAAAGAACATTCACGCTTGGAAACAGTGCGGT
CGTTGCGACTTTACGGCAAAAGGCGTTCACGGACTCGATCTACACTACCGGAAGGCCCAT
GCCTCCTCCGAGGCAGTGACGTCATCGAGTGCGAGTTATGGCTCTGACGTCATGCCCTGT
GGAAGATCGGCTCCGAACTTGGAGTTATCAACTACCTCGAGCTCAGCTACCGAAAAAGTA
TCCCCGAATAGTTATGAAATGAGCTTCCGCGATCAGCAATGTGATAGCCCGCTCACGTCA
TCAGCCTACCCCACCCCGCCACTTTCCAATTCCCCATCATACATCAAGAAGAATTTTACT
CCGTTGGATTTAAGCGGTGCCGAGAAAAACCTCGTCGACAAGAATACATCGTCCACTCAA
ACGTCACCCGCTGCCTCTGACGTCAAATCACGCACGTGTCGTCATTGTGACGTCATATTC
GGTGATGAGATGATGCATGCCCTACACATGAGCTGTCACGACAAGACAGATCCATTCAAG
TGCACGATTTGCAGCCAGAAATGTCACGAAAAATACTATTTTAACGTCCACCTGCTACGA
GGGCTCCACCAAACGAATAACGGCGGGCAAAGCGAGTCGTCGCAAGAGGTCGCAACAGAG
GTTGTGAACCGGGAAGTGACAGAGGGTGATGCGCGACGCAGTCGTTCCAACAGCGCCTGC
AGTGATGCACGGTAAACTAAAATTCATCGTCGGCTTCACGTTTAACGTGCAGAGAACAAA
ATATTGTGGTGACACTGTAATATTCGCTCAATGATGTTCCATGACAATCACAAAGAAAAC
TTCATATCGAAACAGCAAAGCATCTTTTTTTAATTAAGCCGTTGAGTAGTGCATGCTGTC
TCACCGTGCTTTGCCGCTATACCGCAAAATCAGTTCCGCCAAATTTTCCTAATTTCTATT
TCTTTTGATCGAATTATTTCGTCGCGAAATTCGCCAATTTATTCGTTCCCGCAACCCTGC
TCATTATTTATTTTTGCATTATGTCACATGACGTCGCTTTTTGTATACCATATACGACAC
CTATGGCTGCATACCAAACAAAATGCAATTCAATTTGTTGGTCGTTCCCTATTTTTTTTG
CTCTGTAATTTGTTCCGCACGCGCCTCCTATTAATAAGTTTTGCCATATTTCGTTTCCTG
TAAGCTTGCATGACACAATTGGCGTAGTGTATATATACATCGGGAAGAATAAATTGAACT
GCGAGACT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[288-396] 1.3E-33 |
| SMART |
Fork_head_dom (IPR001766) - T[297-388] 6.8E-36 |
| CDD |
Fork_head_dom (IPR001766) - T[299-377] 1.49679E-35 |
| Pfam |
Fork_head_dom (IPR001766) - T[299-382] 3.4E-29 |
| PRINTS |
Fork_head_dom (IPR001766) - T[299-312] 9.2E-18 - T[320-337] 9.2E-18 - T[345-362] 9.2E-18 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[299-395] 31.68 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[299-394] 7.71E-30 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[345-351] . |
| SMART |
Znf_C2H2_type (IPR013087) - T[607-632] 9.6 - T[897-920] 14.0 - T[1031-1053] 21.0 - T[1059-1083] 5.1 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[1033-1053] . - T[1061-1083] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXG1_HUMAN | 45 % | 109 | 6.9E-25 |
| FOXI1_HUMAN | 46.341 % | 107 | 1.24E-24 |
| FOXL1_HUMAN | 51.485 % | 107 | 4.12E-25 |