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  1. Transcript 'KH2012:KH.C5.64.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C5.64.v1.A.SL1-1

Possible name(s)

ZNF143; ZNF367; ZNF76

Gene model

KH2012:KH.C5.64

Location

KhC5 [1,464,983 / 1,469,061]

Sequences

Amino acid sequence

Length: 517

>KH.C5.64.v1.A.SL1-1
GLHTCKLYFIMSYSFPYQQHTRHPTSVMMSPIKGMQQPMYRNYSDCGSMSAYQNLPMVYS
NWPQWPTDYGSTNNQLPQMNRRYGVGMPAVSTPLSPATPTSHRTLTAVEPISPAVRPALP
NNNISMPPIGTSPVPSVSNHALSTPTGSKRGRPRADVISTLQYFGSNSSCTIRCRVCRRV
FPREKSLQAHLRTHTGERPYRCDFPNCTKSFVQSGQLKTHQRLHSGEKPFRCSNEVCKVR
FTHANRHCPDHPEAKLLRDDPGALVGLLESGKKEDSLIAEWLNKYVRLRMDRASSISQPK
SNLKRELSENSASDDDEKNVEKSLQQSHDIKANSMPQMRLHTPLVKRQLLADTPGCKDDA
EEPAVRIPLSPKRMDQNGQVMKFDPRQPFKKRILAYNKLLMRRSNDARDKCPPQGSAKQK
LNLNENLHWKNSLPSPILESKLKCSEKFSFLEELESNSDLILTTNISPVKGKAKKENVVN
NASLSPVSEPTDRWNGALALIQLASSPPSRKVKESDH

Nucleotide sequence

Length: 2,229

>KH2012:KH.C5.64.v1.A.SL1-1
ATATTTTGTTCACTAAGGTCTACATACATGTAAACTTTATTTTATCATGTCATATTCGTT
CCCATACCAGCAACATACAAGACACCCAACTTCAGTTATGATGTCTCCTATTAAAGGAAT
GCAACAACCAATGTACAGAAACTATTCAGATTGCGGAAGTATGTCCGCCTACCAAAACCT
ACCAATGGTGTATTCGAATTGGCCACAATGGCCAACTGATTATGGTTCCACCAACAACCA
ATTGCCGCAAATGAACAGACGTTATGGAGTTGGCATGCCTGCTGTATCAACACCATTAAG
CCCAGCAACACCAACGTCACATCGTACACTAACTGCAGTGGAACCTATATCTCCTGCTGT
ACGACCTGCATTACCAAACAACAATATAAGCATGCCTCCTATTGGTACATCACCCGTACC
TAGTGTGTCAAACCATGCTTTGTCTACACCTACAGGATCAAAGAGAGGACGTCCACGTGC
AGATGTAATCTCCACATTACAATATTTCGGGTCAAATTCAAGTTGCACGATTCGCTGTCG
AGTTTGCCGCAGAGTTTTTCCGCGCGAAAAATCGTTACAAGCGCATCTACGTACTCATAC
AGGGGAAAGACCGTACAGATGTGATTTTCCAAACTGCACGAAGTCATTTGTACAAAGTGG
ACAATTAAAAACCCACCAACGATTGCATTCTGGGGAAAAACCATTCAGATGTTCCAATGA
AGTTTGTAAAGTCCGATTCACCCATGCAAATCGCCACTGTCCTGACCACCCTGAAGCAAA
ACTATTACGAGATGATCCTGGTGCATTAGTTGGCTTGCTTGAAAGTGGAAAGAAAGAAGA
TAGCTTGATTGCTGAATGGTTAAACAAATATGTCAGACTCAGGATGGACAGAGCGTCATC
CATTTCACAACCAAAGTCGAATTTAAAGAGAGAATTATCAGAGAATTCAGCCAGTGACGA
TGATGAAAAGAATGTTGAGAAGTCGTTACAACAAAGCCATGATATTAAGGCAAATTCCAT
GCCACAGATGCGACTACATACTCCACTTGTTAAGCGACAACTCCTCGCTGATACTCCTGG
ATGTAAAGATGACGCAGAGGAGCCAGCAGTCCGCATCCCACTTTCACCAAAGAGGATGGA
TCAGAATGGACAAGTAATGAAGTTTGATCCACGACAACCATTCAAGAAACGAATCCTCGC
TTATAATAAGTTATTGATGCGGAGGAGCAATGATGCAAGAGATAAGTGTCCTCCGCAAGG
ATCAGCAAAACAGAAACTTAATTTGAACGAAAACTTGCATTGGAAGAATTCTTTACCATC
ACCAATATTAGAATCAAAGCTAAAATGCTCAGAAAAATTTAGTTTTCTTGAAGAGTTGGA
ATCGAATTCTGATTTAATTTTAACAACAAACATAAGCCCTGTGAAAGGAAAGGCAAAGAA
GGAAAATGTGGTGAATAATGCTTCTTTGAGTCCAGTAAGTGAACCAACTGATAGATGGAA
TGGGGCATTAGCGCTCATTCAGCTTGCATCAAGCCCACCATCGCGAAAAGTAAAAGAGTC
AGATCATTAAATAACTCTTATTGCGTTCAAAAAGTTCCACTGTTTATAAAACAAACTTAT
AATTGCACTGTTAGGTTTCAGAAGCTTGTTTCAAACAATTGCTCTTTTATATTTTAAATG
TTCCAAGTCAGTTTCTCAAGCAAATCATTGTTTTTGAGTTTTCCTGATCAGACATGCCTT
GTAATTTGATAACTTTCTTTGATATTCGACTCTTAGTGTTAAATCTCCCACTAATTGTAA
TGAGATGCTATTATTTACACCATGCAGGTTTAAACCTGTTTTGATGACACATTTTGTTTG
TTATGTTGCTATGCAACATTTAAATCAACTTTGTACCACTGCCACGTCAACACGTTTTTG
TTGATTTATTCCTTTTTTAGATTTGCAATTAGGTGTTCGCTGCTTCATGCTAAGCAGCAT
TATTGGCTGCTCTAATTAATGTGTAGTAGCATGTGCACAAATGTTTTATTGGAATATTTA
TGTATTTTCAATCAATTATATATTATTGTTGCATGTCGTACAGTTAATTTCTCTGGTGAA
AGCTGGCTGTGTGTTGTTGCTTCTTATGGGTGTTTTAATTATATTGTGTTTTATTATTAC
CAATATTACTTAGCAATTCTTCATATTCAGAAGATACTTTGCACACAGATAGCAATAAAA
GAGAAACAG

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[172-194] 0.0014 - T[200-224] 0.0017
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[172-199] 14.711 - T[200-229] 16.249
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[174-194] . - T[202-224] .
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[181-233] 5.35E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN143_HUMAN 52.174 % 85.1 1.78E-17
ZNF76_HUMAN 47.222 % 83.6 6.25E-17
ZN367_HUMAN 47.087 % 188 4.29E-55