- Clone 'AHC0AAA149YI15' >
- Clone 'AHC0AAA250YM10' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C5.632.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.632.v1.A.SL3-1
Possible name(s)
POC1A; POC1B; THOC3
Gene model
Location
KhC5 [1,665,761 / 1,669,774]
Amino acid sequence
Length: 320
>KH.C5.632.v1.A.SL3-1
WLKMSSLPQLQQHFKQNSKSKEYSAHSSKVHSVAWNKDGRKLASGSYDQTAAVFILDRDK
LTKDFSCKGHTDSVDQLCWNPCNSEVFATASGDKTVRIWDARSGKSSSTINTKGENINIC
WSPNGSSIAVGNKEDLVTFIDTKTFRTRNHEQFKVEINEITWNNSNDLFFLTTGLGTIQI
HSYPDMKLIQSLNGHTANCICIEFDSTGKYFATGSADALVNLWDTNELICVRTFSRLDWP
VRTLSFSSNGQLLASASEDLFIDISCVATGEKVCEVPCDSPTFTLAWHPKHKLLAYACDD
KDKYNRDAGSVKLFGLPTES
Nucleotide sequence
Length: 1,104
>KH2012:KH.C5.632.v1.A.SL3-1
TGTGGTTAAAAATGAGTTCCCTGCCACAATTGCAACAGCACTTCAAACAAAACAGTAAAT
CAAAGGAATATTCTGCTCATAGTTCTAAAGTACATTCTGTAGCTTGGAATAAAGATGGGA
GAAAACTAGCATCTGGTTCTTATGATCAAACAGCCGCTGTTTTTATCCTCGATCGAGATA
AATTGACAAAAGACTTCTCATGCAAAGGTCACACAGATAGTGTTGATCAATTATGTTGGA
ACCCTTGTAACTCAGAGGTGTTCGCTACTGCCTCTGGTGACAAAACAGTTCGCATATGGG
ATGCACGGTCGGGAAAATCTTCTTCTACAATTAATACAAAAGGTGAGAACATCAACATAT
GTTGGAGTCCTAATGGCTCAAGTATTGCTGTTGGTAATAAAGAAGATCTTGTTACTTTCA
TTGACACTAAAACATTTCGAACAAGAAACCATGAGCAGTTTAAAGTTGAGATAAATGAAA
TAACATGGAACAACAGCAACGATTTGTTTTTTCTCACAACTGGTTTGGGAACAATCCAAA
TACACAGTTACCCAGATATGAAGTTAATCCAATCATTAAATGGTCACACAGCCAACTGCA
TCTGCATTGAATTTGATTCAACTGGAAAATACTTTGCTACTGGTAGCGCTGATGCATTGG
TTAATTTATGGGACACCAATGAACTGATTTGTGTGCGGACTTTTTCAAGACTTGATTGGC
CAGTTCGAACCTTAAGCTTCAGTTCCAATGGCCAACTACTAGCATCAGCATCTGAGGATT
TATTCATAGATATTTCATGTGTCGCTACAGGGGAAAAAGTTTGTGAGGTTCCATGCGATT
CACCCACATTCACGCTTGCTTGGCATCCAAAGCATAAACTCTTGGCGTATGCATGTGACG
ATAAGGATAAATACAACAGAGATGCTGGTTCAGTCAAGTTATTTGGTCTCCCTACTGAAT
CGTGATGTTTTGTAGCTTAAAAAACATAAATTCACTGCCAGTAAAGTAAAACTCTGCTTT
TATATCAATCGTAAACGTCAGTATACAATATACTACTATATTGTTTTGCTAATTTTGAAT
GGAATAAATTTTCACTCTTTGTAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[9-151] 6.1E-31 - T[152-320] 1.5E-27 |
| SMART |
WD40_repeat (IPR001680) - T[16-57] 3.4E-5 - T[60-100] 5.0E-9 - T[103-141] 43.0 - T[185-224] 5.3E-8 - T[227-266] 2.0 - T[269-315] 57.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[16-301] 1.28E-56 |
| Pfam |
WD40_repeat (IPR001680) - T[20-50] 8.4E-5 - T[66-100] 4.5E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[23-275] 25.576 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[23-64] 10.742 - T[67-109] 14.418 - T[192-233] 13.416 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[42-56] 5.1E-5 - T[87-101] 5.1E-5 - T[211-225] 5.1E-5 |
| Pfam |
TIF_beta_prop-like (IPR013979) - T[106-215] 1.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 27.426 % | 91.7 | 1.03E-20 |
| POC1B_HUMAN | 25.694 % | 83.6 | 8.38E-18 |
| THOC3_HUMAN | 64.939 % | 452 | 7.44E-161 |