- Transcript 'Boleac.CG.SB_v3.S266...' >
- Transcript 'KH2012:KH.C5.63.v1.R...' >
- Transcript 'KH2012:KH.C5.63.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.63.v2.A.nonSL5-1
Possible name(s)
NASP
Gene model
Location
KhC5 [611,279 / 619,022]
Amino acid sequence
Length: 374
>KH.C5.63.v2.A.nonSL5-1
FAVQLRKNMVVDASKVTEKEATQTETSEQDLENEYAINLANGKKNLLCGDFPEAVACFQA
TSALQSERFGETSHECAESFYFYGKALLELARVENGVLGNALKGVPQVEEASSESEGEGN
QFEKTKNLPVPDAKQKESKDDSTKKSEDTKKEEKPADTSDVPMEADEPSTSGGVKDEDVK
DEDTEDPDDVPNMQLAWEMLELAKVLYQKKPKSEDNSLLVAQCHSKLGELGLEVENYSQS
IGDFLESLVIHKELLAKHDRRLAETHYNLGLAYTFDKRYDNALEHYTASLNVLDARMEYL
NERIDENDRKKENQSETLAECAEIGEIKDLLPDINSKIEDVIIMKRQEGRLDGSPFRTPS
SAGAGGIGSKRYCC
Nucleotide sequence
Length: 1,394
>KH2012:KH.C5.63.v2.A.nonSL5-1
ATTTGCAGTACAACTACGAAAGAATATGGTTGTTGACGCATCAAAGGTTACGGAAAAGGA
AGCAACACAAACTGAAACAAGTGAACAAGACTTGGAGAATGAATACGCCATCAATCTTGC
AAATGGAAAGAAAAATCTACTCTGTGGGGATTTTCCTGAGGCAGTAGCTTGTTTCCAAGC
CACATCGGCACTTCAATCGGAAAGATTTGGTGAAACATCGCATGAATGTGCCGAGTCATT
CTATTTCTATGGTAAGGCATTGCTGGAGTTGGCACGAGTTGAAAATGGGGTGCTCGGAAA
TGCTTTGAAAGGAGTTCCACAAGTTGAAGAAGCTTCATCAGAATCCGAAGGAGAAGGAAA
CCAGTTTGAAAAAACAAAGAATTTACCAGTACCTGATGCAAAGCAAAAAGAGTCAAAAGA
TGATTCAACAAAGAAGAGTGAAGACACAAAGAAGGAAGAAAAACCAGCAGATACTTCAGA
TGTTCCCATGGAAGCTGATGAACCAAGCACAAGTGGGGGAGTTAAAGATGAAGATGTTAA
AGATGAAGACACCGAGGATCCTGATGATGTTCCCAACATGCAACTCGCGTGGGAGATGTT
GGAACTTGCTAAAGTTCTTTACCAAAAAAAACCGAAAAGTGAAGATAATTCTCTTCTGGT
TGCGCAATGTCATTCGAAATTAGGAGAGTTGGGACTTGAAGTTGAAAATTATTCTCAATC
CATCGGGGACTTCCTTGAGTCGTTGGTCATTCATAAGGAACTTCTTGCAAAACATGATCG
TAGATTGGCAGAGACACATTATAACCTAGGTCTTGCATATACGTTCGATAAGCGATATGA
TAATGCATTGGAACATTACACAGCTTCATTGAATGTCTTGGATGCAAGAATGGAATACCT
AAATGAACGAATTGATGAAAACGACCGCAAGAAGGAAAATCAAAGTGAAACATTGGCTGA
ATGTGCTGAGATAGGAGAGATCAAAGATCTTCTGCCCGACATTAACTCAAAGATTGAGGA
TGTGATAATCATGAAGCGACAGGAAGGTAGATTGGACGGCTCACCATTCAGAACTCCTTC
AAGTGCAGGTGCAGGTGGAATTGGAAGCAAACGATATTGCTGCTGAAAACGTTCCTCACC
CGATGATGAATCGAATGGAGTTTCAAATGAAACTGCTTCAACCAAGAAAATGAAGCAAGA
AAATGAACCAACTGCTGTCATTCAAAGCAATGGAAACCACAATTCTGTGAAGGAAGTTAC
TGCGAATGGAAGCAATGAAAAGTGAGCCAGGATTTAAAGTTCTTTCATGCTGATTAAAAA
CAGTTCCATTTTTTTTTCTACCACTGCCATTTGTTTGTACATTGCGTTCTCCCAATAAAT
TGTGTTTAACTGCA
| SMART |
TPR_repeat (IPR019734) - T[35-68] 480.0 - T[221-254] 110.0 - T[263-296] 0.019 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[102-330] 1.0E-19 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[196-300] 6.64E-10 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[221-254] 5.959 - T[263-296] 9.086 |
| Pfam |
Tetratricopeptide_SHNi-TPR_dom (IPR019544) - T[221-256] 3.9E-7 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[263-296] 9.294 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NASP_HUMAN | 41.83 % | 132 | 5.87E-34 |