- Clone 'cilv022h19' >
- Transcript 'KH2012:KH.C5.608.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.608.v1.A.SL2-1
Possible name(s)
ELAVL3; RAVER1; RAVER2
Gene model
Location
KhC5 [1,801,996 / 1,812,213]
Amino acid sequence
Length: 861
>KH.C5.608.v1.A.SL2-1
LVSNVLLLEQMNFNMREQSRTFMEVSQLEFAKRCRRISIKNIAAGVLNQDILELLKPYFY
QQIHIDKNSLSCKAVLLDGSCAARCLEELNGKMFRGQRLSVSLASCDFMLCVTQLPLSFT
HDQFLSLITPFGTPERCFLVHSDVTGQSKGYGCVEFTSKESSIKAKNQLNGFKIQNNVLQ
VHWLDTIPIHYTGLYSSCLLVEDLPPGFKDQQVLHEVFSQFSTPKFCQLAQCPYNDFAIV
EYADSSQAEESWTKLNGYRIGEFPVKVSFCVPGPRGLVVLNALRASRDLIRGNPCGGLLP
TPVMDHNTNKQLASSLLNHHKDSLNVIPDGLAAVTSKDPQVHQLLNALQNRLTEPQVLNP
SLHNVHHTDIWAQSQLTMNSAMLNHLQHAGRLVGEVPTSLPYRATDGVSHHMSLRSRSGS
ISSCDSGAKAEDEVFEPMRRPSQEDSHPFENTYGLRGVNVEDKIDSTFVGKPILRNTGFG
NTEPVMPHHSLLAHTGNNSHPNTLLFLREESQRSESADSAYSGSQGSNSSDYGFPCHANR
VSNISQCATSNSNLPGHTTRTQGSSLVQEFHHFNSILPPGVQRYPQIPKKVCYDNVLDYT
GSSGAVVTSSGRFSPYPTPGVTSKSQQQQQQVNQPISRELGSNEHMSAFVHCPQSNDVMR
IPRPEINRKDVPTKVPVSVCTSTQPIGGERKFQTLSSLSAVLPHEVEKPTAIIGRTTPHT
RRTRLTPIPGIGHELGADSPTQLQLLGSNLVEGLLGESPRSGGFNASTAGRLLRALNLFS
PTEFVNSPQAVTPIRKRGVGNVLPSPEPSPEAGAYVGQHSQGLGGHYADSYGILGEVMGL
GNSPQHPGMMGLMKRRRSNET
Nucleotide sequence
Length: 3,439
>KH2012:KH.C5.608.v1.A.SL2-1
ATTGGTTAGTAATGTTTTGTTGCTAGAACAAATGAATTTCAACATGAGAGAACAAAGCCG
TACTTTTATGGAAGTTTCACAACTTGAATTTGCAAAAAGATGCCGCAGAATATCAATTAA
AAATATTGCGGCTGGTGTTCTAAATCAGGATATACTTGAGCTATTGAAGCCTTATTTTTA
TCAGCAAATTCATATTGACAAGAATAGCTTATCCTGTAAAGCAGTACTTTTGGATGGATC
ATGTGCTGCCCGTTGTTTGGAAGAATTAAACGGGAAAATGTTCCGCGGTCAACGTCTGTC
TGTATCTCTTGCATCATGTGATTTTATGCTGTGTGTCACTCAACTTCCACTTTCTTTCAC
TCACGATCAGTTTTTAAGTTTGATCACGCCATTTGGGACTCCAGAACGTTGTTTTCTTGT
GCATAGTGATGTAACTGGGCAAAGCAAAGGTTATGGTTGTGTAGAATTCACAAGCAAAGA
ATCGTCTATAAAAGCCAAGAACCAACTCAATGGGTTTAAAATCCAAAACAATGTATTGCA
GGTTCACTGGCTTGATACGATTCCCATCCACTACACCGGACTCTACTCCTCGTGTCTCCT
TGTAGAAGATCTACCACCTGGGTTTAAGGACCAACAAGTCCTGCATGAAGTATTTTCACA
GTTTTCAACCCCAAAGTTTTGTCAGTTAGCCCAATGTCCTTACAATGACTTTGCGATTGT
TGAATATGCTGACTCATCACAAGCAGAAGAGTCTTGGACCAAATTAAATGGATACAGAAT
CGGAGAATTCCCAGTGAAAGTTTCATTTTGTGTCCCTGGACCTCGAGGTCTTGTTGTACT
GAATGCTCTACGTGCGTCGAGGGATTTAATCCGAGGAAACCCGTGTGGTGGTCTCCTACC
AACACCTGTAATGGACCATAATACAAACAAGCAGCTCGCAAGTTCACTGCTCAACCATCA
TAAAGATTCTTTAAATGTTATTCCTGATGGACTGGCTGCAGTTACTTCTAAAGATCCACA
GGTGCACCAGTTGCTTAATGCATTACAAAACCGGTTAACCGAGCCCCAGGTTCTTAACCC
ATCCCTTCATAATGTCCATCACACTGATATATGGGCACAATCACAACTTACAATGAACTC
AGCCATGCTTAACCATCTACAACACGCTGGTCGTTTAGTTGGTGAAGTTCCCACCAGTCT
TCCATACAGAGCAACAGATGGTGTTTCACATCATATGTCTCTACGTAGTCGCAGTGGAAG
TATTTCATCCTGTGACTCGGGTGCTAAAGCTGAAGACGAAGTGTTTGAACCAATGAGGAG
ACCAAGTCAGGAGGATTCTCATCCATTTGAAAACACATATGGTCTACGAGGTGTAAACGT
GGAAGACAAAATCGATTCAACTTTTGTTGGCAAACCCATTTTAAGAAACACTGGTTTCGG
CAACACTGAGCCAGTGATGCCACACCATTCATTACTCGCACATACTGGAAACAACTCGCA
TCCTAATACATTGCTGTTTCTCAGGGAGGAATCACAGCGAAGTGAAAGTGCTGACTCAGC
ATACAGTGGCAGCCAAGGAAGTAATTCATCAGATTATGGTTTTCCATGTCATGCGAATCG
TGTGTCTAACATATCGCAATGTGCAACTTCTAACAGTAATTTACCTGGTCATACAACAAG
AACACAGGGAAGCTCACTTGTGCAAGAGTTTCACCATTTCAACTCCATACTGCCACCTGG
AGTTCAACGCTATCCACAAATCCCGAAGAAAGTTTGTTACGATAATGTGTTGGACTACAC
TGGTTCATCTGGTGCTGTAGTGACATCCAGTGGAAGGTTTTCACCGTACCCAACTCCTGG
TGTAACCAGCAAATCTCAACAACAACAACAACAGGTAAACCAACCCATTAGTCGTGAACT
TGGAAGTAACGAACACATGTCAGCGTTTGTACATTGCCCACAATCTAATGATGTCATGAG
GATCCCACGTCCGGAAATCAACAGAAAAGATGTTCCAACAAAAGTTCCAGTATCCGTATG
CACAAGTACTCAACCAATAGGAGGCGAGAGAAAGTTTCAAACACTCAGTAGTTTGTCTGC
TGTGTTACCTCATGAGGTTGAGAAACCAACAGCCATTATTGGCCGAACCACTCCGCACAC
TCGTCGAACCCGTTTGACCCCCATCCCTGGTATCGGGCACGAACTTGGGGCTGATTCACC
CACCCAACTTCAACTTCTTGGGTCCAACCTGGTGGAAGGGTTGCTAGGGGAATCCCCTCG
TTCCGGGGGTTTCAATGCAAGCACAGCGGGCAGATTACTTCGTGCATTAAACCTGTTTTC
TCCTACAGAGTTTGTGAATTCCCCCCAAGCTGTGACTCCCATTCGTAAGCGAGGTGTTGG
TAACGTTCTTCCATCTCCCGAACCCAGCCCTGAAGCTGGTGCTTATGTAGGCCAGCATTC
ACAGGGGTTGGGGGGTCATTACGCAGATTCTTACGGCATCCTGGGTGAGGTTATGGGGCT
GGGGAATTCCCCGCAACACCCAGGCATGATGGGGTTAATGAAAAGAAGGCGAAGCAATGA
AACATAATCAGGATAGCTAAGCTTGTTCAATTTCTGCTGCTGCTCTGTGATATTTCATCA
CTAATTATGCCATTCATGTTCAAAACCTTTTTATTGCGTTTTTCTTTTTTTACGTTTTAG
TTCATTGCAGTCATGGCAACTGTTGTCATTCCACTTTTCATTATAAAGTAAATAATTCAT
TATATATAATGATAAGAACAATTATAAGTTGCAGCGATACGCCTAATACTGCTTCTCCCT
AAAGTTTTATAAGTTGATTCGAAACACCGCACAATTTTACTTCCTAATTCGCATTGTGTT
TCGTATATTTTCATTGTTCTTATTTCGCTTTACGACATCGGCTTCTCTTTCCCTTACGCG
GCGGGAAATCAGTCCTCCAATTCTCGTCGACGAATTCTACTTCTCCCTTCGTTCTAACTT
CAGATTCGACTTTTCTATTCTCGCGTAAGAAAAGTTTTCGCGGCTGCCACACTTTTCTTT
TTTTCACAATAGCTGGGTGCGCTTGTTTTTATTCAATAGCTTTTATCGTCCCGTTCCGTA
ACTGCTCACCAAATTTGCCAAAATGGACAAAAATGTCAGTTCCCTTCCGAGGTAGGTAAT
TTTAACCGTGTGCCCTTACTAACCGGACAACTTCTCGTTCACTCCGGTTCAGGTATTCAT
GTTTGTGTTAAATAAAGCATCACCAGATTCAGGTGTCGTTTATTCAGTACGGACAAATAA
CGTTTTTTCAGATTTTTTCGGGGTAATTTAATAAATGTATAGTACTGTGGGTAAGTGAGT
ACATGGTTTTATAATTCTTTGAATGTTCTTCATTTACTTCTAAGTCGGTCGAGAAAATAT
AATGAAAGGTTGTCCCATT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[24-33] 2.6E-51 - T[35-105] 2.6E-51 - T[106-185] 2.6E-51 - T[196-286] 4.1E-11 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[31-105] 2.44E-6 - T[109-273] 1.42E-25 |
| SMART |
RRM_dom (IPR000504) - T[36-102] 0.025 - T[109-182] 1.3E-14 - T[198-268] 3.5E-5 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[108-186] 11.725 - T[197-272] 8.842 |
| Pfam |
RRM_dom (IPR000504) - T[110-179] 9.5E-14 - T[199-265] 1.7E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RAVR1_HUMAN | 38.783 % | 189 | 5.45E-51 |
| RAVR2_HUMAN | 36.678 % | 193 | 6.88E-52 |