- Transcript 'KH2012:KH.C5.58.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.58.v4.A.SL5-3
Possible name(s)
ACTG1; ACTR1A; ACTR1B
Gene model
Location
KhC5 [154,172 / 159,851]
Amino acid sequence
Length: 397
>KH.C5.58.v4.A.SL5-3
YLRSCIFIKRRLSHIDRLLMDSYDIITNQPVVIDNGSGMVKAGFAGEQVPKSYFPNYIGR
PKHVRVMAGALEGDIFIGPKAQEHRGLLNIRYPMEHGIVTDWNDMERIWQYVYSKNELQT
FPEEHPVLLTEAPLNPRRNRERAAEIFFETFNVPAFFVSIQAVLSLYSAGKITGLVLDAG
DGVTHAVPIYEGFSLPHSIIRTDIAGRDVTKYLQLLLRKEGFNFKTSAEKEIVKTIKEKA
CYLSQNPSKEEGLENEKKLYSLPDGNSIEIGLAKFRAPEVLFQPDLIGEECLGVHEVVTN
SIQKCDMDLRRTLYQNILLAGGSTLFKGFGDRLLSDIKRQAPKDVKIRMLAAQERLYSTW
IGGSILASLDTFKKMWVGKREYEEDKHRAVHRKMLQF
Nucleotide sequence
Length: 1,950
>KH2012:KH.C5.58.v4.A.SL5-3
TGTGATTTTGAATCACATGTGGAATTTCTCGATATTTTAATATTTAACTGATTAGTATTT
AAGGAGTTGTATTTTTATCAAGAGAAGGTTGTCACACATTGATCGGTTACTGATGGATTC
CTATGATATTATTACAAACCAACCCGTCGTTATTGATAATGGATCTGGAATGGTGAAAGC
GGGCTTTGCAGGTGAACAAGTTCCAAAATCATATTTCCCAAATTATATTGGACGACCGAA
GCATGTGAGAGTGATGGCCGGAGCACTTGAGGGCGATATATTCATTGGACCAAAAGCTCA
GGAACATAGAGGTCTCTTAAATATAAGATATCCTATGGAGCATGGAATTGTTACGGATTG
GAATGATATGGAGAGAATATGGCAGTATGTTTATTCTAAGAATGAACTTCAAACTTTCCC
AGAGGAACATCCAGTTCTACTTACTGAGGCTCCACTTAACCCTCGTCGCAACAGAGAACG
TGCAGCTGAAATATTCTTTGAAACTTTTAATGTTCCGGCATTCTTTGTTTCCATTCAAGC
TGTTTTATCTTTATATTCAGCGGGAAAGATTACGGGCTTGGTACTCGATGCAGGTGATGG
TGTCACTCATGCTGTGCCGATATACGAAGGCTTCTCACTTCCACACTCAATCATTAGAAC
TGATATTGCTGGAAGAGATGTAACCAAATATTTACAATTATTGTTGCGGAAAGAAGGTTT
CAACTTCAAAACTTCTGCAGAAAAAGAAATTGTGAAGACAATCAAAGAGAAAGCTTGTTA
TTTGTCTCAAAACCCAAGCAAAGAAGAAGGTCTTGAAAATGAAAAGAAACTTTATTCATT
ACCTGACGGCAACAGCATTGAAATTGGATTGGCAAAGTTCAGAGCTCCTGAAGTTTTATT
TCAACCAGATCTTATTGGTGAAGAGTGTTTAGGTGTTCATGAGGTTGTGACTAATAGCAT
ACAGAAATGTGACATGGATTTAAGGAGGACACTTTATCAAAATATTCTTCTTGCTGGTGG
ATCAACTTTGTTTAAAGGTTTTGGTGATCGGTTATTAAGTGATATTAAACGACAAGCACC
AAAAGATGTGAAAATAAGAATGTTAGCTGCACAGGAGAGACTTTATTCAACATGGATTGG
GGGGTCAATTCTTGCTTCACTCGACACCTTTAAGAAGATGTGGGTGGGCAAGCGTGAATA
TGAAGAGGACAAACATCGAGCTGTGCACAGAAAAATGCTGCAGTTCTGATAACCTCTTTT
GTGCATCTTTGTATTATGCTGTAGAGGAAAGATTAGTAAATTTTATTTGATATCTATGGT
TGCTATGTTTATTCGACCAGGGCAAGTACGCCTCATAGATCCATATAATGTGATAAAATG
ATCATACACTTTAAACTTTTTTATTTCTAGTGCTTATTAAGAAAACAAAACTAATAGTAC
CAACATTTTATACTGATGGTAATGGTATTGCATTAACACTGCTTTACATAAGCGTTATGA
AATAGGAATTTCAATTATGTTTAATGTTAACACTCAGTGTTTTAAAAGGCATGTTCGTTG
TTATATATTATTAAATTCTGTGTCTTTCAAATTGAATCAGAATTATAATTGTGTTGTCAC
AGGTGGTTTGTATTAATTTAAGGATTGACACTTGTGCAGACAAACAAGATTAGATTAGAT
TTAAAATGTCAAAATATTTGACTAAGATATTGATTTGTCTTTACGTTTATACAAAGAAGG
TTTCGTGCAGTTATTTATGGTTGGTACGCCAAGCATAATTAATTCATGAGCTTTGTAAGC
AAAGTGAAACTGCTAGCAGTGAAACTCAGATAAAGTTGTTAGGATTGCCTCCGATGATGC
TTCCCTTTGGCATGGGTTTTTTCTTTTTAATTTAATCATTTACTAAAACTAATCAATAAG
TGCATTGAGTAAGATTGTAATTTATTTTCC
| PANTHER |
Arp1 (IPR029909) - T[20-393] 1.3E-217 |
| PANTHER |
Actin (IPR004000) - T[20-393] 1.3E-217 |
| SMART |
Actin (IPR004000) - T[28-395] 1.6E-196 |
| Pfam |
Actin (IPR004000) - T[28-394] 5.6E-129 |
| PRINTS |
Actin (IPR004000) - T[49-58] 5.5E-32 - T[72-83] 5.5E-32 - T[84-106] 5.5E-32 - T[139-152] 5.5E-32 - T[164-183] 5.5E-32 - T[256-272] 5.5E-32 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[128-140] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 54.768 % | 447 | 2.04E-157 |
| ACTY_HUMAN | 75.798 % | 629 | 0 |
| ACTZ_HUMAN | 77.128 % | 632 | 0 |