- Transcript 'Boleac.CG.SB_v3.S15....' >
- Clone 'man27h03' >
- Transcript 'KH2012:KH.C5.58.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.58.v4.A.nonSL6-3
Possible name(s)
ACTG1; ACTR1A; ACTR1B
Gene model
Location
KhC5 [154,172 / 159,892]
Amino acid sequence
Length: 397
>KH.C5.58.v4.A.nonSL6-3
YLRSCIFIKRRLSHIDRLLMDSYDIITNQPVVIDNGSGMVKAGFAGEQVPKSYFPNYIGR
PKHVRVMAGALEGDIFIGPKAQEHRGLLNIRYPMEHGIVTDWNDMERIWQYVYSKNELQT
FPEEHPVLLTEAPLNPRRNRERAAEIFFETFNVPAFFVSIQAVLSLYSAGKITGLVLDAG
DGVTHAVPIYEGFSLPHSIIRTDIAGRDVTKYLQLLLRKEGFNFKTSAEKEIVKTIKEKA
CYLSQNPSKEEGLENEKKLYSLPDGNSIEIGLAKFRAPEVLFQPDLIGEECLGVHEVVTN
SIQKCDMDLRRTLYQNILLAGGSTLFKGFGDRLLSDIKRQAPKDVKIRMLAAQERLYSTW
IGGSILASLDTFKKMWVGKREYEEDKHRAVHRKMLQF
Nucleotide sequence
Length: 1,991
>KH2012:KH.C5.58.v4.A.nonSL6-3
AATTTAAAGTAAACTTTGCCGAGATTGTTGTAAATTTAAAGTGTGATTTTGAATCACATG
TGGAATTTCTCGATATTTTAATATTTAACTGATTAGTATTTAAGGAGTTGTATTTTTATC
AAGAGAAGGTTGTCACACATTGATCGGTTACTGATGGATTCCTATGATATTATTACAAAC
CAACCCGTCGTTATTGATAATGGATCTGGAATGGTGAAAGCGGGCTTTGCAGGTGAACAA
GTTCCAAAATCATATTTCCCAAATTATATTGGACGACCGAAGCATGTGAGAGTGATGGCC
GGAGCACTTGAGGGCGATATATTCATTGGACCAAAAGCTCAGGAACATAGAGGTCTCTTA
AATATAAGATATCCTATGGAGCATGGAATTGTTACGGATTGGAATGATATGGAGAGAATA
TGGCAGTATGTTTATTCTAAGAATGAACTTCAAACTTTCCCAGAGGAACATCCAGTTCTA
CTTACTGAGGCTCCACTTAACCCTCGTCGCAACAGAGAACGTGCAGCTGAAATATTCTTT
GAAACTTTTAATGTTCCGGCATTCTTTGTTTCCATTCAAGCTGTTTTATCTTTATATTCA
GCGGGAAAGATTACGGGCTTGGTACTCGATGCAGGTGATGGTGTCACTCATGCTGTGCCG
ATATACGAAGGCTTCTCACTTCCACACTCAATCATTAGAACTGATATTGCTGGAAGAGAT
GTAACCAAATATTTACAATTATTGTTGCGGAAAGAAGGTTTCAACTTCAAAACTTCTGCA
GAAAAAGAAATTGTGAAGACAATCAAAGAGAAAGCTTGTTATTTGTCTCAAAACCCAAGC
AAAGAAGAAGGTCTTGAAAATGAAAAGAAACTTTATTCATTACCTGACGGCAACAGCATT
GAAATTGGATTGGCAAAGTTCAGAGCTCCTGAAGTTTTATTTCAACCAGATCTTATTGGT
GAAGAGTGTTTAGGTGTTCATGAGGTTGTGACTAATAGCATACAGAAATGTGACATGGAT
TTAAGGAGGACACTTTATCAAAATATTCTTCTTGCTGGTGGATCAACTTTGTTTAAAGGT
TTTGGTGATCGGTTATTAAGTGATATTAAACGACAAGCACCAAAAGATGTGAAAATAAGA
ATGTTAGCTGCACAGGAGAGACTTTATTCAACATGGATTGGGGGGTCAATTCTTGCTTCA
CTCGACACCTTTAAGAAGATGTGGGTGGGCAAGCGTGAATATGAAGAGGACAAACATCGA
GCTGTGCACAGAAAAATGCTGCAGTTCTGATAACCTCTTTTGTGCATCTTTGTATTATGC
TGTAGAGGAAAGATTAGTAAATTTTATTTGATATCTATGGTTGCTATGTTTATTCGACCA
GGGCAAGTACGCCTCATAGATCCATATAATGTGATAAAATGATCATACACTTTAAACTTT
TTTATTTCTAGTGCTTATTAAGAAAACAAAACTAATAGTACCAACATTTTATACTGATGG
TAATGGTATTGCATTAACACTGCTTTACATAAGCGTTATGAAATAGGAATTTCAATTATG
TTTAATGTTAACACTCAGTGTTTTAAAAGGCATGTTCGTTGTTATATATTATTAAATTCT
GTGTCTTTCAAATTGAATCAGAATTATAATTGTGTTGTCACAGGTGGTTTGTATTAATTT
AAGGATTGACACTTGTGCAGACAAACAAGATTAGATTAGATTTAAAATGTCAAAATATTT
GACTAAGATATTGATTTGTCTTTACGTTTATACAAAGAAGGTTTCGTGCAGTTATTTATG
GTTGGTACGCCAAGCATAATTAATTCATGAGCTTTGTAAGCAAAGTGAAACTGCTAGCAG
TGAAACTCAGATAAAGTTGTTAGGATTGCCTCCGATGATGCTTCCCTTTGGCATGGGTTT
TTTCTTTTTAATTTAATCATTTACTAAAACTAATCAATAAGTGCATTGAGTAAGATTGTA
ATTTATTTTCC
| PANTHER |
Arp1 (IPR029909) - T[20-393] 1.3E-217 |
| PANTHER |
Actin (IPR004000) - T[20-393] 1.3E-217 |
| SMART |
Actin (IPR004000) - T[28-395] 1.6E-196 |
| Pfam |
Actin (IPR004000) - T[28-394] 5.6E-129 |
| PRINTS |
Actin (IPR004000) - T[49-58] 5.5E-32 - T[72-83] 5.5E-32 - T[84-106] 5.5E-32 - T[139-152] 5.5E-32 - T[164-183] 5.5E-32 - T[256-272] 5.5E-32 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[128-140] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 54.768 % | 447 | 2.04E-157 |
| ACTY_HUMAN | 75.798 % | 629 | 0 |
| ACTZ_HUMAN | 77.128 % | 632 | 0 |