- Clone 'cima8108251' >
- Transcript 'KH2012:KH.C9.9.v1.A....' >
- Transcript 'KH2012:KH.C9.9.v2.A....' >
- Transcript 'KH2012:KH.C9.9.v1.A....' >
- Transcript 'KH2012:KH.C5.58.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.58.v2.A.nonSL6-2
Possible name(s)
ACTG1; ACTR1A; ACTR1B
Gene model
Location
KhC5 [155,755 / 159,892]
Amino acid sequence
Length: 334
>KH.C5.58.v2.A.nonSL6-2
YLRSCIFIKRRLSHIDRLLMDSYDIITNQPVVIDNGSGMVKAGFAGEQVPKSYFPNYIGR
PKHVRVMAGALEGDIFIGPKAQEHRGLLNIRYPMEHGIVTDWNDMERIWQYVYSKNELQT
FPEEHPVLLTEAPLNPRRNRERAAEIFFETFNVPAFFVSIQAVLSLYSAGKITGLVLDAG
DGVTHAVPIYEGFSLPHSIIRTDIAGRDVTKYLQLLLRKEGFNFKTSAEKEIVKTIKEKA
CYLSQNPSKEEGLENEKKLYSLPDGNSIEIGLAKFRAPEVLFQPDLIGEECLGVHEVVTN
SIQKCDMDLRRTLYQNILLAGGSTLFKGLFKQFI
Nucleotide sequence
Length: 1,279
>KH2012:KH.C5.58.v2.A.nonSL6-2
AATTTAAAGTAAACTTTGCCGAGATTGTTGTAAATTTAAAGTGTGATTTTGAATCACATG
TGGAATTTCTCGATATTTTAATATTTAACTGATTAGTATTTAAGGAGTTGTATTTTTATC
AAGAGAAGGTTGTCACACATTGATCGGTTACTGATGGATTCCTATGATATTATTACAAAC
CAACCCGTCGTTATTGATAATGGATCTGGAATGGTGAAAGCGGGCTTTGCAGGTGAACAA
GTTCCAAAATCATATTTCCCAAATTATATTGGACGACCGAAGCATGTGAGAGTGATGGCC
GGAGCACTTGAGGGCGATATATTCATTGGACCAAAAGCTCAGGAACATAGAGGTCTCTTA
AATATAAGATATCCTATGGAGCATGGAATTGTTACGGATTGGAATGATATGGAGAGAATA
TGGCAGTATGTTTATTCTAAGAATGAACTTCAAACTTTCCCAGAGGAACATCCAGTTCTA
CTTACTGAGGCTCCACTTAACCCTCGTCGCAACAGAGAACGTGCAGCTGAAATATTCTTT
GAAACTTTTAATGTTCCGGCATTCTTTGTTTCCATTCAAGCTGTTTTATCTTTATATTCA
GCGGGAAAGATTACGGGCTTGGTACTCGATGCAGGTGATGGTGTCACTCATGCTGTGCCG
ATATACGAAGGCTTCTCACTTCCACACTCAATCATTAGAACTGATATTGCTGGAAGAGAT
GTAACCAAATATTTACAATTATTGTTGCGGAAAGAAGGTTTCAACTTCAAAACTTCTGCA
GAAAAAGAAATTGTGAAGACAATCAAAGAGAAAGCTTGTTATTTGTCTCAAAACCCAAGC
AAAGAAGAAGGTCTTGAAAATGAAAAGAAACTTTATTCATTACCTGACGGCAACAGCATT
GAAATTGGATTGGCAAAGTTCAGAGCTCCTGAAGTTTTATTTCAACCAGATCTTATTGGT
GAAGAGTGTTTAGGTGTTCATGAGGTTGTGACTAATAGCATACAGAAATGTGACATGGAT
TTAAGGAGGACACTTTATCAAAATATTCTTCTTGCTGGTGGATCAACTTTGTTTAAAGGT
TTGTTTAAGCAATTTATATAACACAGTGGCAGTGTGTTTGATACTGCTACCAGCATGTAT
TATTAGACAGATCAAGAGTTTGCTGCCCTATAAAAAAACAAGTATAATTTATAACATATA
AGTGAGCATGATGTAAATGAAATAGGAATGCTTGAGCTACCCCACATCTGCCATGTATCG
ATAATAAATCACGTTAGTT
| PANTHER |
Arp1 (IPR029909) - T[20-329] 3.2E-177 |
| PANTHER |
Actin (IPR004000) - T[20-329] 3.2E-177 |
| Pfam |
Actin (IPR004000) - T[28-329] 5.0E-100 |
| SMART |
Actin (IPR004000) - T[28-334] 1.5E-133 |
| PRINTS |
Actin (IPR004000) - T[49-58] 2.3E-32 - T[72-83] 2.3E-32 - T[84-106] 2.3E-32 - T[139-152] 2.3E-32 - T[164-183] 2.3E-32 - T[256-272] 2.3E-32 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[128-140] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 55.116 % | 376 | 3.34E-130 |
| ACTY_HUMAN | 75.484 % | 520 | 0 |
| ACTZ_HUMAN | 76.774 % | 523 | 0 |