- Clone 'ma329d05' >
- Clone 'ma161h10' >
- Clone 'mae39h22' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C5.58.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.58.v1.A.SL2-1
Possible name(s)
ACTG1; ACTR1A; ACTR1B
Gene model
Location
KhC5 [155,427 / 159,796]
Amino acid sequence
Length: 343
>KH.C5.58.v1.A.SL2-1
YLRSCIFIKRRLSHIDRLLMDSYDIITNQPVVIDNGSGMVKAGFAGEQVPKSYFPNYIGR
PKHVRVMAGALEGDIFIGPKAQEHRGLLNIRYPMEHGIVTDWNDMERIWQYVYSKNELQT
FPEEHPVLLTEAPLNPRRNRERAAEIFFETFNVPAFFVSIQAVLSLYSAGKITGLVLDAG
DGVTHAVPIYEGFSLPHSIIRTDIAGRDVTKYLQLLLRKEGFNFKTSAEKEIVKTIKEKA
CYLSQNPSKEEGLENEKKLYSLPDGNSIEIGLAKFRAPEVLFQPDLIGEECLGVHEVVTN
SIQKCDMDLRRTLYQNILLAGGSTLFKGQNLQSLLLNYTHSAK
Nucleotide sequence
Length: 1,221
>KH2012:KH.C5.58.v1.A.SL2-1
TATTTAAGGAGTTGTATTTTTATCAAGAGAAGGTTGTCACACATTGATCGGTTACTGATG
GATTCCTATGATATTATTACAAACCAACCCGTCGTTATTGATAATGGATCTGGAATGGTG
AAAGCGGGCTTTGCAGGTGAACAAGTTCCAAAATCATATTTCCCAAATTATATTGGACGA
CCGAAGCATGTGAGAGTGATGGCCGGAGCACTTGAGGGCGATATATTCATTGGACCAAAA
GCTCAGGAACATAGAGGTCTCTTAAATATAAGATATCCTATGGAGCATGGAATTGTTACG
GATTGGAATGATATGGAGAGAATATGGCAGTATGTTTATTCTAAGAATGAACTTCAAACT
TTCCCAGAGGAACATCCAGTTCTACTTACTGAGGCTCCACTTAACCCTCGTCGCAACAGA
GAACGTGCAGCTGAAATATTCTTTGAAACTTTTAATGTTCCGGCATTCTTTGTTTCCATT
CAAGCTGTTTTATCTTTATATTCAGCGGGAAAGATTACGGGCTTGGTACTCGATGCAGGT
GATGGTGTCACTCATGCTGTGCCGATATACGAAGGCTTCTCACTTCCACACTCAATCATT
AGAACTGATATTGCTGGAAGAGATGTAACCAAATATTTACAATTATTGTTGCGGAAAGAA
GGTTTCAACTTCAAAACTTCTGCAGAAAAAGAAATTGTGAAGACAATCAAAGAGAAAGCT
TGTTATTTGTCTCAAAACCCAAGCAAAGAAGAAGGTCTTGAAAATGAAAAGAAACTTTAT
TCATTACCTGACGGCAACAGCATTGAAATTGGATTGGCAAAGTTCAGAGCTCCTGAAGTT
TTATTTCAACCAGATCTTATTGGTGAAGAGTGTTTAGGTGTTCATGAGGTTGTGACTAAT
AGCATACAGAAATGTGACATGGATTTAAGGAGGACACTTTATCAAAATATTCTTCTTGCT
GGTGGATCAACTTTGTTTAAAGGCCAAAACTTACAATCACTATTATTAAATTACACTCAT
TCAGCAAAGTGAAAAATGCGTGTTAAAATGGCAAATTCAATCTGCTGGAGTAAAAAATAG
ACCATAAGAAATTTGACCGTTTCTAGTTTCTGAACTACTAAAGAAAACCGATATAATGAA
TGTTATAATGAATGCTTTATGAGGTATTCAATTGACCTTTTATGGGGTATTCAATTAAAC
CAAATCTGTTTTTTTTTTAAT
| PANTHER |
Arp1 (IPR029909) - T[20-329] 4.5E-177 |
| PANTHER |
Actin (IPR004000) - T[20-329] 4.5E-177 |
| Pfam |
Actin (IPR004000) - T[28-328] 1.5E-99 |
| SMART |
Actin (IPR004000) - T[28-343] 2.9E-138 |
| PRINTS |
Actin (IPR004000) - T[49-58] 2.7E-32 - T[72-83] 2.7E-32 - T[84-106] 2.7E-32 - T[139-152] 2.7E-32 - T[164-183] 2.7E-32 - T[256-272] 2.7E-32 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[128-140] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 55.298 % | 375 | 6.84E-130 |
| ACTY_HUMAN | 75.728 % | 521 | 0 |
| ACTZ_HUMAN | 77.023 % | 523 | 0 |