- Transcript 'KH2012:KH.C5.562.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.562.v1.A.SL1-1
Possible name(s)
DAG1
Gene model
Location
KhC5 [2,058,124 / 2,069,827]
Amino acid sequence
Length: 1,218
>KH.C5.562.v1.A.SL1-1
QDRYPRIFQNIYKFQYSIRILLLESLKMPSIKDRTCCLTSSAFRSLEFPLIILASALLVL
PSNAQLGNGMPMLQPSRTLFPSFGRQEPDTMYRSHETELLQADWLQEKTCHFVATTGKLF
NQSVTQELKSIYSKDIMDGDTVKVYVPDEHISDWIYFTESSNSLVGVPLLRHTDLLHNVI
ISLQRHGDVIYTLPCVIEVTIGSSGNRKQNVDSSLETSVLQCAPSEPIVTIAVTLDVNQE
QLDPHKRVELIQKFAKYLIPSLNPSAITLSFQDTGRHHAFLSGHGNVAVTPLVTGTTLSW
PIACGSDSAELSGLDDIEESSRNGSLAHVLGYDVIQWRAENRKPLVTLHPTNERRFKRRT
DREKYRSPVPQYPPATALYPKNALDLAPYDQVADEPQPKENYWAAGLRGRKRIPLSEIKA
SPVIGFPPATRLPNPDSLARKFPVPPSTPVIIPPLNSPPEKNAGVEDLRVQGSTYFEYAI
PIDAFSDRESGDTRSLSLSLIDLFSYDPLDGGEDSDGTNTWLLMDQQSQIIYGVPPRPTP
SGKPPSFIIVAADNVGKTTTDTFAVHLVARPRPTNHRFTMVFSNHNTERKSTSLASAFAR
CLSFALGSRWEAIAAPGHYTILKITKNNEQLTVSWFDNSLGSKTRCDRTGIERTWSKMVS
NQLNPSLEIQRSRPKSSFAKKFLPEFTLRSVKLTSIGPCLALPETTTQSTTESTTPPTIP
PPPPSPPKTKSTTRKPTTTTRMPSPPPITMMPKLTTTTTIRTSKQPVDSTTKTTTTTLLH
QPESFLPTTIKSTTTSKRFPVVPQVVDPDFTFEISCHIGVICEQDIPDTLYSSQISQGDL
RYRLVPWGDGTPQWVAVDTNKNTIVALPTLTDIRTLDQFKSGEVTWKGGLVAIDQSGRPS
DRVPVNIKITIPSATTLDENLAVTHLFVMKITNYQLENFTAVESGRLLDALSKLYRNPNT
DMLYVHPLQSGSVMFSWHNTSLTXXGHCPYIEIAKXXSELFDSGKLKTSVQNKLLAAGFN
IGSLKLERKNACLNVKEAGIPPASTTKATTTTANPADGGDSLQTAGGDGVTSIVIIAVVL
VCLLVLVAILVIKFRLSNKAKQKRKEKKRLQSAAATAAIIPPSSPYHLDDKKNHNGSNAD
TRLLFKPGTPIVFEGEEENGVHGNSPLLHRQTSTFTHSAPNTSPVTNGGQGVITESTPLT
PSKGVDQSRPPPPPYVRK
Nucleotide sequence
Length: 4,237
>KH2012:KH.C5.562.v1.A.SL1-1
CGGTGTTGTGTTATTAGTTGTGCATGTTACTGTAACAATTTGGCAAGTCACAAGGTCTGA
ACAGTTTAGGAAGACATGATTCAAGTTGATTTTTACGAATTATAGCAAGATCGATACCCA
AGAATCTTTCAAAATATTTACAAATTTCAATACTCAATCCGAATACTTTTATTGGAGTCT
TTAAAAATGCCATCAATAAAGGATCGGACCTGTTGTCTTACGTCTTCGGCTTTCCGAAGC
CTGGAATTCCCGCTGATTATTCTTGCCAGCGCCCTTCTCGTTTTACCATCAAACGCGCAG
CTGGGAAACGGAATGCCGATGTTACAACCAAGCCGAACATTATTCCCAAGTTTTGGTAGG
CAAGAACCAGATACAATGTACAGAAGTCATGAAACCGAACTTCTCCAAGCCGATTGGTTA
CAAGAAAAAACTTGTCATTTTGTTGCCACGACAGGGAAACTTTTTAACCAATCAGTAACC
CAGGAATTAAAGTCAATATATTCAAAAGATATAATGGATGGCGATACTGTAAAGGTGTAC
GTACCGGACGAACATATTAGCGATTGGATTTACTTTACCGAATCCAGCAATTCACTTGTG
GGCGTTCCGTTGTTACGTCATACCGACCTTCTTCACAACGTCATCATCAGTTTGCAACGT
CACGGTGACGTCATATACACCCTCCCATGTGTGATTGAGGTCACAATAGGAAGTAGCGGA
AATAGAAAACAAAACGTCGATTCGTCACTCGAAACATCCGTTCTCCAGTGCGCCCCTAGC
GAACCGATTGTTACAATCGCCGTGACGCTAGATGTCAACCAGGAGCAACTGGATCCTCAC
AAACGAGTTGAGTTGATACAAAAGTTTGCAAAATATCTCATCCCATCTCTCAATCCTTCG
GCCATTACGTTGAGTTTTCAAGACACAGGCAGACACCATGCATTTCTCTCAGGCCATGGC
AACGTAGCAGTTACCCCGCTTGTGACAGGCACAACACTTTCTTGGCCTATTGCTTGTGGC
TCGGACTCGGCCGAACTATCTGGCCTTGATGACATTGAAGAATCTTCACGTAACGGCAGT
CTTGCTCACGTACTTGGTTATGACGTTATTCAGTGGCGAGCTGAAAACAGAAAGCCACTT
GTAACTCTTCATCCAACAAATGAAAGAAGATTTAAAAGACGAACTGATCGTGAGAAGTAT
CGATCCCCAGTTCCACAATATCCCCCAGCAACAGCTCTATATCCTAAAAATGCTCTTGAT
CTTGCTCCGTATGATCAAGTGGCAGATGAACCACAACCAAAAGAGAATTACTGGGCTGCA
GGTCTTCGTGGGCGGAAAAGAATCCCTTTATCAGAGATCAAAGCATCTCCTGTTATTGGA
TTTCCTCCTGCAACTAGACTACCCAACCCTGATTCCTTGGCGCGAAAATTTCCAGTTCCA
CCTAGCACCCCTGTTATCATACCCCCTTTAAATTCCCCCCCTGAAAAAAATGCTGGGGTT
GAGGACTTGCGTGTTCAAGGGTCAACATATTTTGAGTATGCTATACCAATCGATGCATTC
AGTGATCGAGAAAGTGGAGACACAAGGTCTTTGTCTCTTTCACTGATAGATCTTTTTTCA
TATGATCCTCTGGATGGTGGTGAAGACAGTGATGGAACAAACACATGGCTACTAATGGAT
CAACAAAGCCAAATCATATATGGAGTCCCACCTAGACCGACGCCTTCAGGAAAACCACCA
TCTTTCATTATTGTGGCTGCGGACAATGTGGGAAAAACAACGACAGACACTTTCGCAGTT
CATCTTGTAGCTCGACCAAGGCCAACCAACCACAGGTTTACGATGGTATTTTCGAACCAC
AATACAGAAAGAAAAAGCACCTCCCTTGCAAGTGCATTTGCTCGATGCCTTTCTTTTGCT
CTTGGTTCTCGCTGGGAAGCAATAGCAGCCCCTGGTCATTATACCATCCTTAAAATCACT
AAAAACAATGAACAACTCACAGTCAGTTGGTTTGATAACTCATTGGGATCAAAAACCCGC
TGTGATCGAACAGGAATAGAGAGAACTTGGTCAAAAATGGTGTCAAATCAACTTAACCCA
TCGTTAGAAATCCAACGTTCAAGGCCAAAGTCAAGTTTTGCTAAAAAGTTTTTACCAGAA
TTTACTCTTCGTTCTGTGAAGCTTACATCTATTGGACCATGCTTGGCATTGCCAGAAACA
ACCACACAAAGCACCACTGAGTCAACCACACCACCTACCATCCCCCCACCACCACCTTCA
CCACCAAAAACTAAATCAACAACAAGAAAACCAACAACAACAACAAGAATGCCATCACCA
CCTCCCATCACAATGATGCCCAAACTTACAACAACAACAACAATTCGGACGTCTAAACAA
CCAGTTGATTCAACAACCAAAACAACAACAACAACATTATTACACCAACCAGAATCTTTT
CTTCCAACAACAATAAAATCAACAACAACATCTAAACGATTCCCAGTGGTACCTCAGGTC
GTTGACCCTGACTTTACCTTTGAGATATCATGCCACATTGGGGTTATCTGCGAGCAGGAC
ATCCCAGATACTCTGTATTCCTCTCAGATCAGCCAAGGTGATCTTCGGTATAGGTTAGTG
CCTTGGGGTGATGGCACACCACAATGGGTAGCTGTTGACACCAATAAAAATACAATAGTT
GCTTTGCCAACACTGACTGATATAAGAACACTAGACCAGTTTAAAAGTGGTGAAGTCACA
TGGAAAGGGGGTCTGGTAGCAATTGATCAATCTGGTCGTCCGTCAGACAGAGTTCCAGTT
AACATTAAGATCACCATACCTTCAGCTACAACACTTGATGAAAATCTTGCTGTCACTCAT
CTGTTTGTGATGAAAATCACCAATTATCAACTGGAGAATTTTACTGCAGTGGAATCTGGT
CGATTACTTGATGCTCTCAGCAAGTTGTATAGAAATCCAAATACAGACATGTTGTACGTT
CATCCACTACAATCAGGCTCCGTCATGTTTTCATGGCACAACACCTCCCTAACCNNNNAA
GGCCACTGCCCTTACATAGAAATAGCAAAGCTNNGATCGGAACTATTTGACAGCGGCAAA
TTAAAGACAAGTGTTCAGAATAAATTGCTAGCAGCCGGTTTTAACATTGGTTCCCTAAAG
TTGGAAAGAAAAAATGCTTGTCTAAATGTTAAGGAAGCTGGAATTCCTCCTGCCAGTACA
ACCAAAGCAACTACCACAACAGCAAATCCTGCAGATGGTGGTGACTCTTTACAAACTGCT
GGCGGAGACGGCGTTACCAGCATTGTGATTATAGCGGTGGTGTTAGTTTGCCTGCTTGTA
TTAGTTGCTATACTTGTAATAAAGTTCAGGTTAAGCAACAAAGCAAAGCAGAAGAGGAAA
GAAAAGAAGAGACTTCAATCTGCAGCTGCAACGGCTGCTATAATACCACCTAGTTCACCT
TACCACCTTGATGATAAAAAGAACCACAATGGTTCGAATGCAGACACACGACTACTGTTT
AAACCGGGGACCCCGATCGTATTCGAGGGTGAGGAAGAAAATGGGGTCCATGGGAATTCC
CCTCTTTTGCATAGACAAACAAGTACTTTTACCCACTCAGCACCCAACACATCTCCAGTC
ACTAATGGGGGTCAGGGAGTAATAACTGAATCTACGCCATTAACACCAAGCAAAGGGGTG
GACCAGTCGCGCCCCCCACCACCACCTTATGTGCGAAAATAAACCCAATTCCTTTCGCAG
CCACAATGCTTCACAATTTACCCATTCACTGTACCTGTATCTAATCTCGCACCTTTGTTG
ATGAATTTTAATTTTTCATAGGTTATAATTTATGCCACAACGAATCATGGCCACGCAAGA
GTTTCTTTTCACGCCGCTTCAACTTCATTATCGTGGCCACTGATGCCAAAACTTGGCAAT
TAAAACATGTTTAAACTAAAAGGGCAAACAAACTGCATAAAGAAGGTGTCATTTTTACAA
AAGATGTTCTGTTGTTTTAGCACCTAATCCCATATTAAATATTCTATCCACATTTTCTTT
CTAAAGTTATGTATTCGTTCTACCATTGGTTCGGTACATTTGACTTGCCTTTAAAATATC
CTTTGCGGCCAGTTATTAATTTGTTTTTTTTCATTTTTTTCGGCCAAGTTGTCGCAATTA
TATTACCCATGTTATAAATAAACACGTACTTTCTCTT
| Gene3D |
Alpha-dystroglycan_domain_2 (IPR027468) - T[221-359] 1.2E-25 |
| SUPERFAMILY |
Alpha-dystroglycan_domain_2 (IPR027468) - T[222-344] 8.37E-15 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[459-569] 8.95E-7 |
| SMART |
Cadg (IPR006644) - T[460-574] 0.0026 |
| ProSiteProfiles |
SEA_DG_dom (IPR030398) - T[573-698] 29.196 - T[922-1031] 23.017 |
| Pfam |
DAG1 (IPR008465) - T[947-1135] 3.2E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|