- Transcript 'KH2012:KH.C5.554.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.554.v1.A.nonSL1-1
Possible name(s)
ATOH1; NEUROD6; NEUROG2
Gene model
Location
KhC5 [2,025,242 / 2,026,381]
Amino acid sequence
Length: 315
>KH.C5.554.v1.A.nonSL1-1
TYFQINQHTMTSLQYEQVSRTFSTNKVNSRKRRSDDVTISVAKKRRSNSAGKERDRLHVF
NPALETLQSVIPVRLTEQRKLHKKQTLQLAIRYINFLRGCLDGTRDWKERNRFWCRTQDE
MVIDAIDQAAAGHNVHCDVTSPQMTSPESESPPPPSGSYTQINYETVQPFIMDHNQDCSP
QLRHWNEESPCCDVTYPLETTSIQNLQNYDQLYSQYDPTTSFLTSYFQHNSIPQDDVMKS
NIANLPVLDPHNLIENPSSNYDIPNNCNGNPPLNKLDCAQQTVASSTLFADLEEILSSPE
NNCYLPESPESGYYS
Nucleotide sequence
Length: 991
>KH2012:KH.C5.554.v1.A.nonSL1-1
ACTTACTTTCAAATCAATCAACACACGATGACGTCATTACAGTACGAACAAGTTTCTCGA
ACCTTCTCAACCAACAAGGTGAACTCGCGAAAACGTCGATCTGATGACGTCACAATAAGC
GTCGCAAAGAAACGTCGTTCGAATTCTGCTGGGAAAGAACGCGATCGACTTCATGTATTT
AACCCAGCACTAGAGACGCTACAGAGCGTAATACCTGTTCGTTTAACAGAGCAGAGAAAA
CTCCACAAGAAACAAACACTCCAGTTGGCGATCCGTTACATCAATTTCCTCCGTGGCTGT
TTGGATGGTACACGAGATTGGAAGGAAAGAAACAGATTTTGGTGTCGAACTCAGGATGAG
ATGGTCATCGACGCTATCGATCAAGCCGCTGCTGGACATAACGTTCATTGTGATGTGACG
TCACCACAGATGACGTCACCAGAAAGTGAGTCACCTCCACCACCATCAGGATCTTATACA
CAGATCAACTACGAAACAGTTCAGCCTTTCATTATGGATCACAATCAGGATTGTTCACCT
CAGTTACGTCACTGGAACGAAGAAAGCCCGTGTTGTGACGTCACATATCCCTTGGAAACA
ACGTCAATTCAAAATCTACAAAACTATGACCAACTCTATTCTCAATACGACCCAACTACG
TCATTCCTGACGTCATACTTCCAACACAACAGTATTCCTCAAGATGACGTAATGAAATCA
AACATTGCGAACTTACCAGTACTTGACCCACATAACTTAATAGAAAACCCATCTTCAAAT
TACGACATACCCAATAACTGTAATGGAAACCCACCCTTAAATAAGCTCGACTGTGCACAG
CAGACTGTAGCGAGCTCAACTTTATTTGCGGACCTCGAAGAAATTTTGTCTTCACCAGAA
AACAATTGTTATCTTCCTGAAAGTCCTGAGAGCGGTTATTACTCGTAGTCGTGTTTGTTC
GTGTTGTAAATAAATTTAATTTAATACTGCA
| PANTHER |
Twist-related (IPR015789) - T[7-270] 7.4E-81 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[36-112] 1.09E-11 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[41-107] 2.6E-13 |
| CDD |
bHLH_dom (IPR011598) - T[43-98] 3.58092E-7 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[44-97] 11.941 |
| Pfam |
bHLH_dom (IPR011598) - T[45-97] 5.7E-8 |
| SMART |
bHLH_dom (IPR011598) - T[50-103] 0.0026 |
| Protein Name | Identity | Bit Score | e-value |
|---|
