- Transcript 'KH2012:KH.C5.54.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.54.v3.A.SL5-1
Possible name(s)
ERCC8; KATNB1; WDR5
Gene model
Location
KhC5 [3,015,710 / 3,018,104]
Amino acid sequence
Length: 191
>KH.C5.54.v3.A.SL5-1
EDNRVLLWDVRQAKAVLHNLDQHNGDTTASSAAVGTAHTGSVNSILFSEDGRYLLTFATD
QRLHLWNTDTGKNTLVNYGRIDNPSKHRYLGMTLYKGGATSSIAFVPSGRQINMLDFYTG
AHLRRLAGHFSDVRCCEYNPYRQELYSAGQTSNVLIWSPAEPDSEATVPSNGQNLAPTAS
SLLLDNWSDSD
Nucleotide sequence
Length: 1,121
>KH2012:KH.C5.54.v3.A.SL5-1
CGAAGACAATCGGGTTCTGTTATGGGACGTCCGACAAGCAAAGGCAGTGTTGCACAACCT
CGATCAACACAACGGGGACACCACGGCAAGCTCAGCTGCAGTCGGCACAGCTCACACTGG
AAGTGTGAACAGCATTCTATTCAGTGAGGATGGTCGGTATCTACTCACATTTGCTACCGA
CCAACGACTGCATTTGTGGAATACTGATACCGGCAAAAATACGTTAGTGAACTACGGTCG
AATTGACAACCCATCAAAACATCGCTACCTCGGTATGACGTTATACAAGGGCGGTGCCAC
TTCTTCAATAGCGTTCGTGCCTTCGGGTCGCCAAATTAACATGTTGGATTTCTACACTGG
TGCTCACCTGCGCCGCTTAGCGGGACACTTCAGCGACGTAAGGTGCTGCGAATACAACCC
TTATCGACAGGAATTGTATTCCGCTGGTCAAACGTCCAACGTTCTGATTTGGAGCCCAGC
AGAACCTGATTCGGAAGCTACAGTGCCATCTAACGGTCAGAACCTGGCGCCCACCGCATC
ATCTTTGCTGTTAGATAACTGGAGTGACAGCGATTGAATAAAGCCTTTCTTACATGGTTG
GCTTAATAAAGTTTGCGGAATTGTGGCCGCAGTTATCCATAGAAGAATGAAATTTTAGTT
TTCGAAGGTGGAAATAGGCAGGGGGGACTCTTTCTGTGCAAACAATTATAGATGTCAAAT
GTGTTTGACGCTGTATTTGCATTGCTATACGTGTTCACATATTTCTGTTTTCACTTGCTT
GTATTGGCGCCCGTTACTGATTGAATTCTCGTGAATATACGAATCTAGTTTCATAGTCCC
GAATGTCATTTTGTTAATTAAATAGTTTAAATAGATCCGTAGACGTAACATGCTCATATT
GTGACATAACGTCTACATTCAGGTTTCCTGTTGCTAATAGTAGCTAGTAAGCTGTCTGTT
CCTTGTGAAAGTTTACTCTTGTTTCCCGCTATTTACTATTTCGTCCCGTTGATCATTAAC
GTAGGTATATGGTATGTTGTGTAAGAGAGAACAGTAACTTCCGTGACAACGACAGTTTGT
TTGCCACTTTTAAATATTTTGTTATTTTGAATTTCGAGTAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-161] 1.6E-42 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-167] 15.795 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[2-168] 1.28E-19 |
| SMART |
WD40_repeat (IPR001680) - T[28-67] 7.0E-4 - T[119-158] 0.0022 |
| Pfam |
WD40_repeat (IPR001680) - T[35-67] 0.0023 - T[122-158] 0.045 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[35-76] 13.382 - T[126-158] 8.804 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ERCC8_HUMAN | 41.753 % | 148 | 3.66E-43 |