- Transcript 'Moocci.CG.ELv1_2.S37...' >
- Transcript 'KH2012:KH.C5.215.v3....' >
- Molecular Tool 'Tbx6b/c/d-MO (Imai's 25mer MO)' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C5.54.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.54.v2.A.nonSL6-1
Possible name(s)
ERCC8; KATNB1; WDR5
Gene model
Location
KhC5 [3,015,710 / 3,019,783]
Amino acid sequence
Length: 199
>KH.C5.54.v2.A.nonSL6-1
QLSITAQSEDNRVLLWDVRQAKAVLHNLDQHNGDTTASSAAVGTAHTGSVNSILFSEDGR
YLLTFATDQRLHLWNTDTGKNTLVNYGRIDNPSKHRYLGMTLYKGGATSSIAFVPSGRQI
NMLDFYTGAHLRRLAGHFSDVRCCEYNPYRQELYSAGQTSNVLIWSPAEPDSEATVPSNG
QNLAPTASSLLLDNWSDSD
Nucleotide sequence
Length: 1,235
>KH2012:KH.C5.54.v2.A.nonSL6-1
AATATACGTCTTATAGGTTATCTAAACAGACGGACAAATAGATGATGCGTATATGCTAGC
ACGTAAATACCTTACGTAGCTCCATAAATAACAACTCAGTATCACTGCACAGAGCGAAGA
CAATCGGGTTCTGTTATGGGACGTCCGACAAGCAAAGGCAGTGTTGCACAACCTCGATCA
ACACAACGGGGACACCACGGCAAGCTCAGCTGCAGTCGGCACAGCTCACACTGGAAGTGT
GAACAGCATTCTATTCAGTGAGGATGGTCGGTATCTACTCACATTTGCTACCGACCAACG
ACTGCATTTGTGGAATACTGATACCGGCAAAAATACGTTAGTGAACTACGGTCGAATTGA
CAACCCATCAAAACATCGCTACCTCGGTATGACGTTATACAAGGGCGGTGCCACTTCTTC
AATAGCGTTCGTGCCTTCGGGTCGCCAAATTAACATGTTGGATTTCTACACTGGTGCTCA
CCTGCGCCGCTTAGCGGGACACTTCAGCGACGTAAGGTGCTGCGAATACAACCCTTATCG
ACAGGAATTGTATTCCGCTGGTCAAACGTCCAACGTTCTGATTTGGAGCCCAGCAGAACC
TGATTCGGAAGCTACAGTGCCATCTAACGGTCAGAACCTGGCGCCCACCGCATCATCTTT
GCTGTTAGATAACTGGAGTGACAGCGATTGAATAAAGCCTTTCTTACATGGTTGGCTTAA
TAAAGTTTGCGGAATTGTGGCCGCAGTTATCCATAGAAGAATGAAATTTTAGTTTTCGAA
GGTGGAAATAGGCAGGGGGGACTCTTTCTGTGCAAACAATTATAGATGTCAAATGTGTTT
GACGCTGTATTTGCATTGCTATACGTGTTCACATATTTCTGTTTTCACTTGCTTGTATTG
GCGCCCGTTACTGATTGAATTCTCGTGAATATACGAATCTAGTTTCATAGTCCCGAATGT
CATTTTGTTAATTAAATAGTTTAAATAGATCCGTAGACGTAACATGCTCATATTGTGACA
TAACGTCTACATTCAGGTTTCCTGTTGCTAATAGTAGCTAGTAAGCTGTCTGTTCCTTGT
GAAAGTTTACTCTTGTTTCCCGCTATTTACTATTTCGTCCCGTTGATCATTAACGTAGGT
ATATGGTATGTTGTGTAAGAGAGAACAGTAACTTCCGTGACAACGACAGTTTGTTTGCCA
CTTTTAAATATTTTGTTATTTTGAATTTCGAGTAA
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-175] 15.557 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[3-169] 2.5E-43 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[8-176] 1.23E-20 |
| SMART |
WD40_repeat (IPR001680) - T[36-75] 7.0E-4 - T[127-166] 0.0022 |
| Pfam |
WD40_repeat (IPR001680) - T[43-75] 0.0025 - T[130-166] 0.048 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[43-84] 13.382 - T[134-166] 8.804 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ERCC8_HUMAN | 41 % | 149 | 1.08E-43 |