- Transcript 'KH2012:KH.C8.396.v1....' >
- Region 'REG00000819' >
- Transcript 'KH2012:KH.L153.32.v3...' >
- Transcript 'KH2012:KH.C5.53.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.53.v1.A.ND1-1
Possible name(s)
GLI2; GLIS1; GLIS3
Gene model
Location
KhC5 [3,843,032 / 3,855,643]
Amino acid sequence
Length: 1,085
>KH.C5.53.v1.A.ND1-1
DYIMAQRVVQQHAAGNSTAYTTSTPHSNERSPDQSLCDSSLSTMGLDSSQVLSPNGQMIC
PRIEVLPETPCPSNRETPAPMPGPPGYGVMSPRTQLPEKFSELRMDQNGTPLTFQDFPTT
TTAAVDTVHHYGQEYHNSLQHNLQGTETGSNLAFHSPQSYIDGFEPQHVHSIPDNFGRQN
MMESGGNVNDHVSVKVEYVDTAENFNFVPKVEEKPKLPHQTSYKEWQGLHTNQPNVLHGA
PRVVASKPLQNSFLQVHQGNQQIKPSTPNSLNPYKVLPPVTPNSTVGATHTLFHEDFLMP
PGSALSTISGLSGLSPFQLSPAGSTFHSPRHSARSGNRLLSANNRKRTHSLSPMSMDGFD
LNNLIRVSPSSLLFTNHISPYGDTPLPNIGPNVSGAEFNGTYGHLIARASVTPPDGTISR
QLLVATPGSMINAPASGEYMSGAYSNIFPSENTNPHSMHATTFHPNSFVSSNHFGPPTQQ
LVVARHQDNLLNDHQPPRPPPYPHTAPHTFDPNTQTSQHNPHHYTNHSTPYTSHIKLNVS
EEEHTMDAYLHSATRSTACTPSPTKTTDAAKLAKESGTWTCMWAECNLFFQDQEDLVKHI
EKVHIDQRKGEEFTCYWMNCPRQYKPFNARYKLLIHMRVHSGERPNKCTFEGCNKAFSRL
ENLKIHLRSHTGERPYVCQHDGCNKAFSNSSDRAKHQRTHQDTKPYACQVPGCNKRYTDP
SSLRKHVKGGHAAKESQQRKKMRSLEMSGAGDNKLGSCLTIQPLHLLPHEDNYSNESGIN
GHGSRRSMHPPMSSSHPFQVNQRNDVVSSMNGASTPIKHNLGNHLHTHVRRTPHPPFAPA
SPHPHALPPLLNQHPSSQNGAHFTNFVQQAVVTTHQQRNPHTRSAYADHEHQQNSDFHHA
ESMQLCDPQLMPPPPAPPLKTRHSDVHGQNSYAASQTRERSHSRNAVQNGHNYLTPHPPT
TSRPHSRRSMLDGTPTRGFLDDTEQEQHSVMEKLRVYAGASPHHLSPRQLVEGVGMSYDA
VQRAISARSNMSVDRGGLDVPPSSPFSMRTNNESMRSHESGTYLQLNAVDRCPSQLSMVY
ADGPV
Nucleotide sequence
Length: 3,922
>KH2012:KH.C5.53.v1.A.ND1-1
GGCATTTTCGCCTTACGTTTTGGTAGTTAAGACTTTGAGATTACATCATGGCGCAGCGTG
TTGTCCAACAGCACGCCGCGGGTAATTCAACCGCTTACACCACCTCGACGCCGCATTCCA
ATGAACGAAGTCCTGATCAGTCCCTATGTGACAGCAGTCTTAGTACTATGGGCTTGGACT
CCAGCCAAGTCCTTTCACCCAATGGACAAATGATCTGCCCGAGAATCGAAGTCCTCCCGG
AAACTCCTTGTCCATCAAATCGGGAAACTCCAGCTCCAATGCCAGGACCGCCTGGATATG
GCGTTATGTCGCCGAGAACCCAGCTCCCAGAGAAATTTTCCGAGCTCCGAATGGATCAAA
ATGGGACACCACTGACGTTTCAAGATTTCCCAACCACGACAACAGCAGCGGTGGATACGG
TGCACCACTATGGGCAGGAGTATCACAACAGTTTGCAACATAACCTTCAAGGAACTGAAA
CGGGGAGCAATCTAGCCTTCCATTCACCTCAGTCGTACATAGATGGGTTCGAACCGCAGC
ATGTTCACAGCATTCCTGATAACTTTGGTAGACAGAACATGATGGAGTCGGGCGGGAACG
TAAATGATCATGTCTCGGTAAAGGTCGAATACGTGGACACGGCAGAAAACTTTAACTTTG
TACCAAAAGTTGAAGAGAAACCAAAACTTCCGCACCAGACCAGTTACAAAGAGTGGCAAG
GGCTGCATACTAACCAGCCAAATGTGCTGCATGGTGCTCCCCGGGTAGTAGCATCAAAGC
CGTTGCAAAACTCGTTTCTACAAGTCCATCAAGGAAATCAACAAATAAAGCCTTCGACCC
CAAACTCCTTGAACCCTTACAAGGTCTTACCCCCGGTCACCCCTAACAGTACTGTCGGGG
CAACACATACTTTATTTCATGAAGACTTTCTAATGCCCCCAGGCAGTGCCTTGTCCACGA
TCAGCGGACTCAGTGGACTCTCCCCGTTCCAGTTATCTCCAGCTGGATCGACCTTCCATA
GCCCAAGACATTCCGCGCGATCTGGTAACAGATTATTATCTGCTAACAACAGAAAACGAA
CACACTCCCTATCTCCAATGTCGATGGACGGATTTGACCTGAACAACTTGATTCGAGTCT
CCCCGAGCTCGCTTTTATTTACGAACCATATTTCGCCGTATGGAGATACTCCGTTACCGA
ACATAGGGCCGAACGTAAGCGGAGCTGAATTTAACGGTACTTATGGACACTTGATCGCAC
GGGCCAGTGTCACTCCGCCGGACGGAACAATATCTCGCCAACTGCTGGTAGCCACCCCGG
GAAGCATGATTAACGCCCCGGCATCAGGAGAATACATGTCCGGCGCATATTCGAACATTT
TCCCGAGCGAAAACACGAACCCTCACTCAATGCACGCGACCACTTTTCACCCCAACTCTT
TTGTGAGTTCCAACCACTTCGGTCCTCCCACGCAGCAGCTGGTAGTAGCAAGACATCAAG
ACAACTTACTGAACGACCATCAGCCACCGAGGCCCCCACCGTACCCGCATACAGCTCCGC
ACACCTTTGACCCGAACACCCAAACTTCCCAACACAATCCCCACCATTACACCAACCACT
CCACACCGTACACCTCGCACATCAAACTCAACGTCTCGGAGGAGGAACATACAATGGACG
CTTACTTGCACAGCGCTACTAGATCCACAGCTTGTACACCTTCACCCACGAAGACAACCG
ACGCCGCGAAGCTTGCTAAGGAGTCCGGCACTTGGACCTGCATGTGGGCGGAATGTAACC
TGTTTTTCCAAGACCAAGAAGACCTGGTCAAGCACATCGAGAAAGTTCATATTGATCAAA
GAAAAGGAGAGGAGTTCACTTGTTATTGGATGAACTGCCCACGTCAGTACAAACCATTCA
ATGCAAGATACAAGCTGCTTATTCATATGAGAGTCCACTCCGGTGAAAGGCCTAACAAAT
GCACGTTTGAAGGTTGCAACAAGGCGTTTTCACGATTGGAAAATCTTAAAATTCACTTAC
GTTCGCACACCGGTGAAAGACCGTACGTCTGTCAACATGATGGATGCAACAAAGCGTTCA
GTAATTCGTCTGACAGAGCTAAACATCAACGTACCCACCAAGATACGAAACCATATGCGT
GCCAAGTGCCTGGATGTAACAAACGTTATACTGACCCATCTTCGTTAAGAAAACACGTGA
AAGGTGGCCACGCTGCAAAGGAGAGTCAGCAAAGAAAGAAGATGCGAAGCCTGGAGATGT
CTGGCGCTGGAGACAACAAACTTGGAAGTTGCCTTACGATTCAACCGTTGCATCTACTGC
CACATGAAGACAACTATAGCAACGAATCGGGTATCAACGGACACGGTAGCAGAAGATCTA
TGCATCCTCCTATGAGCTCCTCGCATCCTTTCCAAGTAAACCAGAGAAACGACGTCGTCT
CTTCCATGAATGGAGCTTCTACCCCGATAAAACACAATCTAGGAAATCACCTTCATACCC
ATGTACGAAGGACCCCACACCCGCCTTTCGCCCCAGCCTCCCCCCACCCACACGCCTTAC
CCCCGCTGCTGAACCAGCATCCCAGCTCACAAAACGGCGCTCACTTCACCAACTTTGTGC
AGCAGGCTGTTGTCACAACCCACCAGCAGCGAAACCCTCACACTAGATCCGCATACGCCG
ACCATGAGCATCAGCAGAACTCTGATTTCCACCATGCAGAATCAATGCAGCTGTGCGACC
CACAGTTAATGCCCCCTCCCCCGGCGCCCCCGTTAAAGACTCGCCACTCCGACGTACACG
GTCAAAACTCTTACGCGGCGTCGCAAACAAGAGAGCGAAGCCACAGCAGAAATGCTGTGC
AGAATGGCCATAACTACCTGACACCTCACCCACCTACAACGTCAAGGCCACATTCCCGAA
GATCCATGTTAGATGGAACACCGACACGAGGTTTTTTGGACGATACTGAACAGGAGCAAC
ATTCTGTCATGGAAAAGCTAAGGGTGTATGCTGGGGCGTCTCCGCATCACTTATCGCCCA
GGCAATTAGTGGAAGGAGTTGGCATGTCTTACGACGCTGTTCAACGCGCCATCTCGGCAC
GCAGTAATATGTCCGTTGATAGAGGAGGTTTAGACGTGCCACCAAGTTCACCGTTCAGTA
TGCGAACCAACAACGAGTCCATGAGAAGCCACGAATCGGGAACCTACTTACAATTGAACG
CAGTGGACAGGTGTCCCAGCCAGCTGTCAATGGTTTACGCTGATGGACCAGTGTGATTTG
ACTAAACGATCGATATAAATTAAACACCTTTTAAGAAGAAGAAGAAAAAGCTTCGTTTTT
TTCATGAGATTTAACTAGACATCATTATACGGTAATTTATTTAGGCACTATGTTTTATGC
CTCCTTTAAATTTTTATATATTTAAATCTGTTCTGAGTTCTCCCATAGTTTCCAAATCAT
ACATAGTGTTTTAAGTTCAATTCTAAAGTGCTAATTCTTCAAGCGTGGTATGCCGGTTTC
TCAACCATATGTCTCTTACCCTGGATATGCACGACACTGCCAGCATACAAATTATGACGG
AATATATTTCGACATAAGCCTACATGTCACTCGTATTAATTGTGATAGCCTGTGCCAAGT
TCCATTTTCATACTGTACAATTCTATTGATTATTCTGTACATAGAGATACATTCTTCTGT
TTTCGCGCATTCTACATTGTGAATCTATATGTTACAAATTTTCTCTTCATTTCTGGCACT
GGTTGCTGGACCATGTTCCTTTGTTTAAGTAAATGTGACATTGTATTGTGTTCGGGTGGT
CACCCTGTTCCATGTGCTAAGCTCTTGGCTCATTTGCTTTTGTTTCACTACATCATTGTG
CACTTTAATAAACTTCACTGTC
| SMART |
Znf_C2H2_type (IPR013087) - T[579-604] 0.24 - T[613-640] 8.6 - T[646-670] 0.0021 - T[676-700] 0.0018 - T[706-731] 7.6E-4 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[579-609] 1.27E-8 - T[627-687] 4.43E-18 - T[670-726] 6.09E-12 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[579-609] 9.785 - T[618-645] 10.907 - T[646-675] 14.752 - T[676-705] 13.526 - T[706-736] 10.72 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[581-604] . - T[648-670] . - T[678-700] . - T[708-731] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLI2_HUMAN | 57.377 % | 233 | 1.28E-62 |
| GLIS3_HUMAN | 71.066 % | 311 | 5.17E-92 |
| GLIS1_HUMAN | 60.851 % | 299 | 3.83E-89 |