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TRANSCRIPT CARD

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  1. Region 'REG00000416' > 
  2. Transcript 'KH2012:KH.C3.330.v2....' > 
  3. Transcript 'Cisavi.CG.ENS81.R23....' > 
  4. Transcript 'KH2012:KH.C12.156.v2...' > 
  5. Transcript 'KH2012:KH.C5.5.v3.R....'

Transcript Model

Transcript Id

KH2012:KH.C5.5.v3.R.nonSL5-1

Possible name(s)

FGF17; FGF18; FGF8

Gene model

KH2012:KH.C5.5

Location

KhC5 [2,812,423 / 2,816,125]

Sequences

Amino acid sequence

Length: 333

>KH.C5.5.v3.R.nonSL5-1
SCLFSAKLIIHSKGLWGRIMIQGVQTERFLCMNKRGRLVGKNYRKAINDPKCLFFEEMLE
NYFDAFSNSKFRDWHIGFHSNGRPKRGPHTKEIGTDEMFIKKCTASSGMVPNPTAASNEK
YKWIIGEFERDVKRHNKKKKRAPLSVLRPNYSVTRDSSTADEVMLADSSRTLSTLPPYVQ
AEIERRRSLYPVLRQQRRLDVTIPPAGGTVSAMDPLYSSPKHRKLPRRNKPRRSRQNKKR
KHRRHKSKWRSTVPTDIVDSDFQPTTGTFTTPFPINSVSEPEAGFIRTPTTAPGLHRQRS
RSGRRRPKQRRRTKKVHGRKQKTGRRNRKRANT

Nucleotide sequence

Length: 1,495

>KH2012:KH.C5.5.v3.R.nonSL5-1
TCTTGTTTATTTTCAGCAAAACTAATAATCCACTCTAAAGGCTTATGGGGTCGGATAATG
ATTCAAGGCGTCCAAACTGAACGGTTTCTTTGCATGAATAAAAGAGGACGACTAGTTGGA
AAGAATTATCGAAAAGCGATCAACGACCCGAAGTGCCTATTCTTCGAAGAGATGTTGGAA
AATTATTTTGATGCTTTTTCGAACTCTAAGTTTCGCGATTGGCATATTGGTTTCCATTCA
AACGGCAGACCAAAGCGAGGTCCACACACCAAAGAAATCGGCACTGATGAAATGTTCATA
AAGAAGTGTACAGCATCCAGCGGTATGGTACCGAACCCGACCGCTGCCAGTAACGAGAAG
TACAAATGGATTATTGGCGAGTTCGAAAGGGACGTGAAGCGACATAACAAGAAGAAAAAG
AGAGCCCCTTTATCTGTTTTAAGACCAAATTATTCTGTCACTAGAGATTCATCAACCGCC
GACGAAGTTATGCTTGCCGACTCTTCCAGAACTTTGTCGACCCTACCTCCGTATGTTCAA
GCTGAAATCGAACGACGACGGAGTCTGTACCCTGTTTTGCGACAGCAGCGTAGACTTGAC
GTTACCATACCGCCAGCAGGTGGGACAGTGTCCGCCATGGATCCGCTGTACTCGAGCCCA
AAGCATCGAAAGTTACCTCGCCGCAATAAACCTAGACGGAGCAGACAAAATAAGAAACGA
AAACACAGAAGACATAAATCGAAATGGAGGTCTACTGTCCCTACTGATATAGTGGATTCA
GACTTTCAACCTACGACTGGGACCTTTACAACACCGTTCCCAATAAACTCTGTAAGCGAA
CCCGAAGCCGGGTTTATTAGAACCCCGACTACAGCACCGGGCCTGCATAGACAACGATCG
CGGAGCGGGAGGCGGCGACCGAAACAGAGAAGACGGACGAAAAAAGTCCATGGTCGGAAA
CAGAAAACCGGTCGGCGGAACCGAAAACGAGCAAACACATGAGCTGGTCAAAAAAGACGG
AACGCGTCGAGTCTGCTTGATTCGAGGTGTAAATCCGAAAAAATAGGAGTTTTTTCCGGA
GGCGAGGACAACTCGTTGAGATTGGAGAAGTGCTGACGGAAAGCGCCGATGATCGTCGGA
ATTTCGGATCCGGGATCTCATTTATCACCGTCCTTTTATACCGAGTGCAATATTTCATCT
TTATGTAGTGTTTTTTTCTCGCGGTGCCATTCGTTAAAAACTCGCAAGGCCCAGCCACGT
CAATATAACATTCCCCAAACGTCTTTGTATTTTTGTTATTTCTGTGGATGCCTTGGTTCC
AGTCGGAACTGGTTTAATCCGGTTCCTTACTCTTTCTCAACCGGTTTCTGAACACATTCC
TCTTACATGACTTCTGCGTCTTTCTATATAGGGCGTGCGTTCGATTGCCTATATATTGCT
TTTGATATGATTTTTACTATTTATTACTCAAAAACAATAAAAACATTATTCAGTG

InterProScan

SMART
Fibroblast_GF_fam (IPR002209) - T[3-103] 3.2E-7
PANTHER
Fibroblast_GF_fam (IPR002209) - T[6-259] 1.5E-58 - T[306-314] 1.5E-58
Pfam
Fibroblast_GF_fam (IPR002209) - T[6-100] 5.0E-26
SUPERFAMILY
IL1/FGF (IPR008996) - T[7-101] 9.62E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FGF18_HUMAN 37.113 % 84 4.04E-19
FGF17_HUMAN 33.884 % 83.2 9.39E-19
FGF8_HUMAN 33.673 % 75.5 6.16E-16