Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.5.v1.R.nonSL2-1

Possible name(s)

FGF17; FGF18; FGF8

Gene model

KH2012:KH.C5.5

Location

KhC5 [2,812,423 / 2,819,180]

Sequences

Amino acid sequence

Length: 408

>KH.C5.5.v1.R.nonSL2-1
NAASKRLQGGLIIYKGFDIFKAKIPPNYIRDYIKSEIFQENVSQSSSTRRYCEIYSKRTS
NHIRILGKKVDGRGRRGSNHAKLIIHSKGLWGRIMIQGVQTERFLCMNKRGRLVGKNYRK
AINDPKCLFFEEMLENYFDAFSNSKFRDWHIGFHSNGRPKRGPHTKEIGTDEMFIKKCTA
SSGMVPNPTAASNEKYKWIIGEFERDVKRHNKKKKRAPLSVLRPNYSVTRDSSTADEVML
ADSSRTLSTLPPYVQAEIERRRSLYPVLRQQRRLDVTIPPAGGTVSAMDPLYSSPKHRKL
PRRNKPRRSRQNKKRKHRRHKSKWRSTVPTDIVDSDFQPTTGTFTTPFPINSVSEPEAGF
IRTPTTAPGLHRQRSRSGRRRPKQRRRTKKVHGRKQKTGRRNRKRANT

Nucleotide sequence

Length: 1,741

>KH2012:KH.C5.5.v1.R.nonSL2-1
ATACAAAGCTTCGCGGGTTAAAATGCTGCTTCAAAACGCCTACAAGGCGGTCTGATCATC
TACAAAGGTTTTGACATTTTTAAAGCAAAGATTCCGCCAAATTACATCAGAGATTACATT
AAAAGCGAAATATTTCAAGAGAACGTAAGCCAATCTTCTTCCACGAGAAGATACTGTGAG
ATTTACTCGAAACGAACCTCGAACCACATTCGAATACTCGGCAAGAAAGTGGACGGGAGA
GGAAGAAGAGGCAGCAATCATGCAAAACTAATAATCCACTCTAAAGGCTTATGGGGTCGG
ATAATGATTCAAGGCGTCCAAACTGAACGGTTTCTTTGCATGAATAAAAGAGGACGACTA
GTTGGAAAGAATTATCGAAAAGCGATCAACGACCCGAAGTGCCTATTCTTCGAAGAGATG
TTGGAAAATTATTTTGATGCTTTTTCGAACTCTAAGTTTCGCGATTGGCATATTGGTTTC
CATTCAAACGGCAGACCAAAGCGAGGTCCACACACCAAAGAAATCGGCACTGATGAAATG
TTCATAAAGAAGTGTACAGCATCCAGCGGTATGGTACCGAACCCGACCGCTGCCAGTAAC
GAGAAGTACAAATGGATTATTGGCGAGTTCGAAAGGGACGTGAAGCGACATAACAAGAAG
AAAAAGAGAGCCCCTTTATCTGTTTTAAGACCAAATTATTCTGTCACTAGAGATTCATCA
ACCGCCGACGAAGTTATGCTTGCCGACTCTTCCAGAACTTTGTCGACCCTACCTCCGTAT
GTTCAAGCTGAAATCGAACGACGACGGAGTCTGTACCCTGTTTTGCGACAGCAGCGTAGA
CTTGACGTTACCATACCGCCAGCAGGTGGGACAGTGTCCGCCATGGATCCGCTGTACTCG
AGCCCAAAGCATCGAAAGTTACCTCGCCGCAATAAACCTAGACGGAGCAGACAAAATAAG
AAACGAAAACACAGAAGACATAAATCGAAATGGAGGTCTACTGTCCCTACTGATATAGTG
GATTCAGACTTTCAACCTACGACTGGGACCTTTACAACACCGTTCCCAATAAACTCTGTA
AGCGAACCCGAAGCCGGGTTTATTAGAACCCCGACTACAGCACCGGGCCTGCATAGACAA
CGATCGCGGAGCGGGAGGCGGCGACCGAAACAGAGAAGACGGACGAAAAAAGTCCATGGT
CGGAAACAGAAAACCGGTCGGCGGAACCGAAAACGAGCAAACACATGAGCTGGTCAAAAA
AGACGGAACGCGTCGAGTCTGCTTGATTCGAGGTGTAAATCCGAAAAAATAGGAGTTTTT
TCCGGAGGCGAGGACAACTCGTTGAGATTGGAGAAGTGCTGACGGAAAGCGCCGATGATC
GTCGGAATTTCGGATCCGGGATCTCATTTATCACCGTCCTTTTATACCGAGTGCAATATT
TCATCTTTATGTAGTGTTTTTTTCTCGCGGTGCCATTCGTTAAAAACTCGCAAGGCCCAG
CCACGTCAATATAACATTCCCCAAACGTCTTTGTATTTTTGTTATTTCTGTGGATGCCTT
GGTTCCAGTCGGAACTGGTTTAATCCGGTTCCTTACTCTTTCTCAACCGGTTTCTGAACA
CATTCCTCTTACATGACTTCTGCGTCTTTCTATATAGGGCGTGCGTTCGATTGCCTATAT
ATTGCTTTTGATATGATTTTTACTATTTATTACTCAAAAACAATAAAAACATTATTCAGT
G

InterProScan

PANTHER	Fibroblast_GF_fam (IPR002209) - T[35-334] 2.5E-78
SUPERFAMILY	IL1/FGF (IPR008996) - T[41-176] 2.75E-33
SMART	Fibroblast_GF_fam (IPR002209) - T[48-178] 1.8E-19
Pfam	Fibroblast_GF_fam (IPR002209) - T[50-175] 4.3E-34

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FGF18_HUMAN	35.938 %	109	5.06E-28
FGF17_HUMAN	30.921 %	99.8	2.58E-24
FGF8_HUMAN	30.769 %	87.8	5.65E-20