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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S7...'
  2. Transcript 'KH2012:KH.C5.431.v3....'

Transcript Model

Transcript Id

KH2012:KH.C5.431.v3.A.ND1-1

Possible name(s)

RANBP2; RANBP3; RANBP3L

Location

KhC5 [109,379 / 117,176]

Sequences

Amino acid sequence

Length: 458

>KH.C5.431.v3.A.ND1-1
TTLIAKFVLVRILKRNISRNLYKMSKSEDNKPQENIVSGTWLKRSRADMVGSSTEATEHE
PEEKRPAFRLQPPTLIHGQAKPVPKSAEDSTNRCKFLQPSKLTVSSTSGAQHKNDKSPLQ
PARIGSGLLVSSSNPFLLTANDSIKEEESVKENETVAPPEQTESKQNGGSADTGEKCVPD
STTDKATTKDTKEGNLFLQSTEVSASASDGFVFGKKMEERVTVAAINSDVAEQESGDAGS
SVSSSEFVFGQNLAERAKVSSSTDPPSLFMPPSNNEPSGLDAKNDSTNQVETKRGGLEED
AAAHFAASQHRTVIPEVEVVTGEEGEKNVLQMQCKLYQFDAKNQNWLERGVGSLHLNDGI
CNDGDVNFQSRLVMRTHGSLRLVLNTKVWPQMTVERASKKSVRVSAQTEDGSISVFLISV
SIYQFSSLTIILCINVERNNKRDAETIGLLILQGSYKE

Nucleotide sequence

Length: 1,677

>KH2012:KH.C5.431.v3.A.ND1-1
TGGATTTATTTTGAGGCAATGAGACGAATCATTAACAGCAAGTCACCAACGCCAACCGTT
TTCAATTTAAAGCTATATTTACTAAAATATCCACAACCCGCACATTTTAAATGGAAATAA
GTCATAAAACTTTTGAACCACCTTGATTGCTAAGTTCGTTTTAGTAAGGATACTAAAGCG
AAATATTTCTCGAAATTTGTACAAGATGTCCAAGAGTGAAGATAATAAACCGCAAGAGAA
TATTGTCAGTGGAACATGGTTAAAAAGATCACGTGCAGACATGGTGGGCTCATCAACAGA
AGCCACAGAACATGAACCAGAGGAGAAGCGACCAGCGTTTCGTCTGCAACCACCAACATT
AATACATGGACAAGCAAAACCTGTTCCGAAATCTGCAGAAGACTCTACAAACCGATGTAA
ATTTTTGCAACCTTCCAAATTAACTGTGTCGTCCACATCAGGAGCACAACATAAAAATGA
CAAGTCTCCCCTTCAACCTGCCAGAATTGGATCTGGACTTCTTGTCTCTTCCAGCAATCC
GTTTTTGCTCACTGCCAATGATTCAATTAAAGAAGAGGAATCTGTTAAAGAAAATGAAAC
CGTCGCCCCTCCTGAACAAACAGAATCAAAACAAAATGGTGGCTCAGCAGATACTGGTGA
AAAATGTGTTCCCGACAGTACCACAGATAAAGCAACAACTAAGGACACTAAAGAAGGAAA
TTTGTTTCTACAAAGCACTGAAGTGTCGGCTTCCGCATCAGATGGATTTGTATTTGGTAA
GAAGATGGAGGAACGTGTTACAGTGGCCGCGATAAACTCGGATGTTGCTGAACAAGAGAG
TGGCGATGCTGGTTCTTCTGTTTCATCATCAGAGTTTGTCTTTGGTCAGAATCTTGCTGA
GCGTGCAAAGGTATCATCAAGTACGGATCCACCATCATTGTTCATGCCACCTAGCAATAA
CGAACCATCTGGTTTGGATGCAAAGAATGATTCAACCAATCAAGTGGAAACAAAGAGAGG
AGGATTAGAAGAAGATGCTGCAGCTCATTTTGCCGCTTCTCAACATCGAACAGTTATACC
CGAAGTTGAAGTTGTTACTGGTGAAGAGGGAGAGAAAAATGTTCTTCAGATGCAGTGCAA
ATTGTATCAATTTGATGCAAAAAATCAAAACTGGTTGGAACGAGGTGTTGGAAGTTTACA
TTTAAATGATGGGATATGTAATGATGGTGATGTCAACTTTCAATCAAGACTTGTTATGCG
AACACATGGGAGTCTGCGTCTTGTTTTAAACACTAAGGTGTGGCCACAAATGACAGTGGA
GCGAGCAAGCAAAAAATCTGTACGTGTTTCTGCTCAAACAGAAGATGGTAGTATTAGTGT
TTTTCTAATATCTGTAAGTATATATCAATTTTCCTCACTTACCATTATTTTGTGTATAAA
TGTGGAAAGGAATAACAAAAGAGATGCTGAAACTATTGGACTGCTAATTCTACAAGGTTC
TTATAAAGAATAGACATACTTTACCATAACCTATGACTTAACATGTTGCAAATATATAGG
AAGCAGGTTTTGTATGTAAGTTCTAAGTTTTGTCTCGAAAAGTTTAGAACTTCTGTGTTA
CATCTTAACACGATAATTTTTATACAAATGCATTAATATAATGTACCAGATATGGTG

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[239-422] 7.7E-35
SMART
Ran_bind_dom (IPR000156) - T[310-428] 7.6E-9
ProSiteProfiles
Ran_bind_dom (IPR000156) - T[314-395] 17.116
Pfam
Ran_bind_dom (IPR000156) - T[318-398] 2.9E-15
ProSiteProfiles
PdxT/SNO (IPR002161) - T[446-458] 9.045

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RANB3_HUMAN 33.257 % 175 9.73E-49
RNB3L_HUMAN 35.581 % 136 1.79E-35