- Transcript 'KH2012:KH.C5.416.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.416.v1.A.nonSL2-1
Possible name(s)
ATOH1; NEUROD6; PTF1A
Gene model
Location
KhC5 [2,027,366 / 2,028,652]
Amino acid sequence
Length: 188
>KH.C5.416.v1.A.nonSL2-1
INQHTMTSLQYEQVSRTFSTNKVNSRKRRSDDVTIGVAKKRRSNSAGKERDRLHVFNQAL
ETLQSVIPVRLTEQRNLHKKQTLQLAIRYINFLRGCLDGTRDWKERNRFWCRTQDEMVID
AIDQAAAGHNVHCDVTSPQMTSPESESPPPPSGCYTQINYETVQPSIDESQSGLFTSVTS
LERRKPVL
Nucleotide sequence
Length: 1,138
>KH2012:KH.C5.416.v1.A.nonSL2-1
ATCAATCAACACACGATGACGTCATTACAGTACGAACAAGTTTCTCGAACCTTCTCAACC
AACAAGGTGAACTCACGAAAACGCCGATCTGATGACGTCACAATAGGCGTCGCAAAGAAA
CGTCGTTCAAATTCTGCTGGAAAAGAACGCGATCGACTTCATGTATTTAACCAAGCACTA
GAGACGCTACAGAGCGTAATACCTGTTCGTTTAACAGAGCAAAGAAACCTTCACAAGAAA
CAAACACTTCAGTTGGCGATCCGTTACATCAATTTCCTCCGTGGCTGTTTGGATGGTACA
CGAGATTGGAAGGAAAGAAACAGATTTTGGTGTCGAACTCAGGATGAGATGGTCATCGAC
GCTATCGATCAAGCCGCTGCTGGACATAACGTTCATTGTGATGTGACGTCACCACAGATG
ACGTCACCAGAAAGTGAGTCACCTCCACCACCATCAGGATGTTATACACAGATCAACTAC
GAAACAGTTCAGCCTTCCATTGATGAATCACAATCAGGATTGTTCACCTCAGTTACGTCA
CTGGAACGAAGAAAGCCAGTATTGTGACGTCACATATTCTTTGGAAACAACTTCAATTCA
AAATCCACAAAACTATGACCAACTCTATTCTCAATACGACCCAACTACGTCATTCCTGAC
GTCATACTTCCAAAACAACAGTATTCGTCAAGATGACGTCACCTATCTAAACAAAGAAAG
CGATGAATTATTCACATCTTTAACCGATGACGTCAGCACTTCTATTGATGACATCACTCC
TACGTTTCCATATTCCAATATGCCAATGAATAATGTGTTCAACGAATTTATTACGTCACC
AGAAAATTTGTTACGTCATCCAGATAGTCCAGACAGTGGTTATTATAGTCTGGTTTAATT
TTGTTTTTTTTTAATATTCTAAACCATATTATGTTTAAAATTTTCTGCATAATAAAAAAA
ACATACCGGACAAACAGTTTTGAGTTTTGAAATTGTCCAAATCAGTCTCGATCCAGGATT
TAACGGGAATTCCCCGACTGTGACGTGTTTTAGACTAGAGTGACGTCACGTTGCGAAGTG
ACGTCAATATTGGTTTAAGCTTTGTATAAACAACAGAGCAAACCTGAAAGAAAAAAAA
| PANTHER |
Twist-related (IPR015789) - T[4-171] 2.9E-69 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[37-107] 1.2E-13 |
| CDD |
bHLH_dom (IPR011598) - T[39-94] 6.96934E-6 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[39-111] 1.01E-11 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[40-93] 11.668 |
| Pfam |
bHLH_dom (IPR011598) - T[41-93] 3.2E-8 |
| SMART |
bHLH_dom (IPR011598) - T[46-99] 0.0016 |
| Protein Name | Identity | Bit Score | e-value |
|---|
