- Molecular Tool 'cicl15d22-MO (Hamada's MO)' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C2.201.v1....' >
- Transcript 'KH2012:KH.C5.416.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.416.v1.A.nonSL1-1
Possible name(s)
ATOH1; NEUROD6; PTF1A
Gene model
Location
KhC5 [2,027,366 / 2,028,664]
Amino acid sequence
Length: 192
>KH.C5.416.v1.A.nonSL1-1
TYFQINQHTMTSLQYEQVSRTFSTNKVNSRKRRSDDVTIGVAKKRRSNSAGKERDRLHVF
NQALETLQSVIPVRLTEQRNLHKKQTLQLAIRYINFLRGCLDGTRDWKERNRFWCRTQDE
MVIDAIDQAAAGHNVHCDVTSPQMTSPESESPPPPSGCYTQINYETVQPSIDESQSGLFT
SVTSLERRKPVL
Nucleotide sequence
Length: 1,150
>KH2012:KH.C5.416.v1.A.nonSL1-1
ACTTACTTTCAAATCAATCAACACACGATGACGTCATTACAGTACGAACAAGTTTCTCGA
ACCTTCTCAACCAACAAGGTGAACTCACGAAAACGCCGATCTGATGACGTCACAATAGGC
GTCGCAAAGAAACGTCGTTCAAATTCTGCTGGAAAAGAACGCGATCGACTTCATGTATTT
AACCAAGCACTAGAGACGCTACAGAGCGTAATACCTGTTCGTTTAACAGAGCAAAGAAAC
CTTCACAAGAAACAAACACTTCAGTTGGCGATCCGTTACATCAATTTCCTCCGTGGCTGT
TTGGATGGTACACGAGATTGGAAGGAAAGAAACAGATTTTGGTGTCGAACTCAGGATGAG
ATGGTCATCGACGCTATCGATCAAGCCGCTGCTGGACATAACGTTCATTGTGATGTGACG
TCACCACAGATGACGTCACCAGAAAGTGAGTCACCTCCACCACCATCAGGATGTTATACA
CAGATCAACTACGAAACAGTTCAGCCTTCCATTGATGAATCACAATCAGGATTGTTCACC
TCAGTTACGTCACTGGAACGAAGAAAGCCAGTATTGTGACGTCACATATTCTTTGGAAAC
AACTTCAATTCAAAATCCACAAAACTATGACCAACTCTATTCTCAATACGACCCAACTAC
GTCATTCCTGACGTCATACTTCCAAAACAACAGTATTCGTCAAGATGACGTCACCTATCT
AAACAAAGAAAGCGATGAATTATTCACATCTTTAACCGATGACGTCAGCACTTCTATTGA
TGACATCACTCCTACGTTTCCATATTCCAATATGCCAATGAATAATGTGTTCAACGAATT
TATTACGTCACCAGAAAATTTGTTACGTCATCCAGATAGTCCAGACAGTGGTTATTATAG
TCTGGTTTAATTTTGTTTTTTTTTAATATTCTAAACCATATTATGTTTAAAATTTTCTGC
ATAATAAAAAAAACATACCGGACAAACAGTTTTGAGTTTTGAAATTGTCCAAATCAGTCT
CGATCCAGGATTTAACGGGAATTCCCCGACTGTGACGTGTTTTAGACTAGAGTGACGTCA
CGTTGCGAAGTGACGTCAATATTGGTTTAAGCTTTGTATAAACAACAGAGCAAACCTGAA
AGAAAAAAAA
| PANTHER |
Twist-related (IPR015789) - T[7-175] 2.2E-69 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[41-111] 1.3E-13 |
| CDD |
bHLH_dom (IPR011598) - T[43-98] 5.19515E-6 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[43-115] 1.05E-11 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[44-97] 11.668 |
| Pfam |
bHLH_dom (IPR011598) - T[45-97] 3.3E-8 |
| SMART |
bHLH_dom (IPR011598) - T[50-103] 0.0016 |
| Protein Name | Identity | Bit Score | e-value |
|---|