Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.34.v1.A.SL1-1

Possible name(s)

ALX3; ALX4; UNCX

Gene model

KH2012:KH.C5.34

Location

KhC5 [652,233 / 655,808]

Sequences

Amino acid sequence

Length: 261

>KH.C5.34.v1.A.SL1-1
NMNMFLSNPFLQMCYPSAISGQIKPETQVPPGFIKNNQTSPPYSLPYLFHSSSTESDKMS
SSATECFSPVFTRRSTDTSYKTEMTSDASLSHQLPSDLWARNSFLSQCILQNSKEANSTD
FYDDDSAENQQNKRRRTRTNFSTWQLEELEKAFGNSHYPDVYMREALALRLDLVESRVQV
WFQNRRAKWRKREHTKKGPGRPPHNAQLTLCSGEPMDPSEIERREKMKQERKKRKQDCNC
KSSLNEKQGRKTSNNQDSIS+

Nucleotide sequence

Length: 803

>KH2012:KH.C5.34.v1.A.SL1-1
GGCTTTTCTATTTTGCGACTTGAAATATGAATATGTTTTTAAGCAACCCGTTTCTTCAAA
TGTGCTATCCGTCCGCAATATCGGGACAGATAAAACCAGAGACACAAGTTCCACCAGGAT
TCATCAAAAACAACCAAACATCACCTCCATATTCTCTGCCGTATTTATTCCACTCTTCAT
CGACGGAAAGCGACAAAATGTCGTCATCAGCCACCGAGTGTTTTTCTCCTGTATTTACTC
GGCGATCTACGGATACTTCGTACAAAACGGAAATGACGTCAGATGCAAGTTTGTCGCATC
AGTTACCTAGTGATTTATGGGCACGAAACTCATTTTTATCCCAATGTATTCTGCAAAACT
CGAAAGAAGCAAACAGCACGGATTTTTACGACGATGATTCGGCAGAAAACCAACAAAATA
AACGACGACGTACAAGAACAAACTTCAGCACTTGGCAGTTAGAAGAGTTGGAAAAAGCTT
TCGGAAATTCTCACTATCCAGATGTATACATGCGAGAGGCACTGGCACTTCGTCTTGATC
TAGTGGAGTCACGTGTCCAGGTTTGGTTCCAAAACCGACGAGCAAAATGGAGGAAGCGTG
AACACACGAAGAAAGGGCCGGGTCGTCCTCCACATAATGCTCAACTCACGTTATGTTCAG
GTGAGCCGATGGACCCAAGTGAAATCGAGCGACGAGAAAAAATGAAACAAGAAAGAAAAA
AGCGAAAACAAGATTGCAATTGTAAAAGCAGCTTGAATGAGAAGCAAGGCAGAAAAACAT
CAAATAACCAAGATTCGATCTCA

InterProScan

SUPERFAMILY	Homeobox-like_sf (IPR009057) - T[118-193] 1.71E-24
ProSiteProfiles	Homeobox_dom (IPR001356) - T[132-192] 20.261
SMART	Homeobox_dom (IPR001356) - T[134-196] 1.5E-24
CDD	Homeobox_dom (IPR001356) - T[135-193] 1.98509E-20
Pfam	Homeobox_dom (IPR001356) - T[135-191] 1.8E-22
ProSitePatterns	Homeobox_CS (IPR017970) - T[167-190] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ALX4_HUMAN	68.657 %	107	5.32E-27
ALX3_HUMAN	70.667 %	109	3.42E-28
UNC4_HUMAN	79 %	172	1.41E-50