- Transcript 'KH2012:KH.C5.217.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.217.v1.B.ND3-1
Possible name(s)
ANKS1B; CASKIN1; CASKIN2
Gene model
Location
KhC5 [4,914,931 / 4,922,674]
Amino acid sequence
Length: 794
>KH.C5.217.v1.B.ND3-1
GNVMLVNPNVNNPSYDDVIYSQQMNDRPHPNSSPNPPITVSRSTQDMGVLKPHISNPGYE
DVLVDHSSNGPISSPSTVSSHYSRQRVSPLPHRSPQSQNWPDNAHNNQQHNIPKENLSRV
STKSSQSSRQAPYVDRSSKELAFNPADEEVFKWLRSFGLEQYTSNFIEHGYDLATISHTS
PADLTAIQIAKPAHRKKLSTHVSQLRKDSPTSPLINEVPNSAFDFLSSLSLTEYVPVFIS
NDVNSLEKILHTTWEDLQVMKINRLGHQKKIILAITKLNQLCKRQPEKFQKTPTPSKIQP
PHYQQYSNLPQEQLHQRESPPQHSPPQHYPTPAPKPQQVTPMSKKPPVQAKPKKNFSSFK
ENPGLSLELQKALSRRQNIIDNAPPSPEQPNTFQKPQKPPVNGSHPHQQGNGPKPSFSEP
THTQPTYPTPPFKQPTYTPPTHTPPSHSPTDVGKSHLTRGPRPSPPRRTTSISEDQEEEE
QRINVRSLAAKMDPIPADTRKMSSVAKIVKTPTSPVHKSGNFSFTPTSLHQSSPPSSIPP
QSYPAPAPKPLVTPKPQVSKKPPVQKKPPTQPPKPHPIAQEPPQVAEKSRKISHGELGKH
FDLSVLDNIDKQKQSVFPIKPSKPTPPVNHTPPQREPMSAPSPQVSNSEPTSSKLHPPPM
DRYDSSSDEFEWPAPPAFEPPPPLPSAISPQNTPVQPPALIVQXXPPPAIKPKLPPKTSS
RQTKPEPPPPKPPHPRNDPVVETVTPPIPDEVLITALTDATDDAPENSESRQNFLDDIGV
MFDDLVLEFDEILK
Nucleotide sequence
Length: 3,613
>KH2012:KH.C5.217.v1.B.ND3-1
GCCGGCAACACCCCTCAAAATGTAGGGGGAGCCCCTGTTTTACCCCACCATAACAACCAC
CACCACCAGTTTTCACCCTGGCCGAAAGTATCAGTAAGCCCCACCAACCGAGCCCCACCT
CACCCACCTAAGTATATAAACGTGGACCCTTCAGGAGCCCCTACACCCCAACCAGCATTA
AATAAGGTAATGTTATGTTAGTGAACCCCAACGTAAACAACCCAAGTTACGATGACGTCA
TATACAGTCAACAAATGAATGATCGGCCACACCCAAACTCCTCCCCCAACCCCCCAATTA
CCGTATCTCGCTCGACACAGGACATGGGGGTGCTCAAACCCCACATATCAAACCCAGGAT
ATGAAGATGTTCTTGTTGACCATTCGTCAAACGGTCCCATTAGCTCCCCAAGCACTGTTT
CGTCACATTACAGTCGTCAGCGTGTATCACCACTACCACACAGATCACCACAGAGCCAAA
ACTGGCCAGATAACGCCCATAATAACCAACAACATAATATTCCAAAGGAAAATCTAAGCC
GAGTGTCCACTAAAAGTAGCCAGTCCAGTAGACAGGCCCCATACGTAGATCGTAGCAGCA
AAGAGCTTGCTTTCAACCCAGCAGACGAGGAAGTGTTCAAGTGGCTGCGATCGTTCGGAC
TCGAGCAGTATACCTCAAACTTTATAGAACACGGTTACGACTTGGCCACAATTTCACACA
CAAGTCCAGCGGACCTTACAGCAATACAAATTGCAAAACCTGCCCATAGAAAGAAGTTAT
CAACCCACGTTAGCCAGTTAAGAAAAGATTCCCCCACGAGCCCCTTAATAAATGAAGTCC
CAAACTCTGCGTTTGATTTTCTAAGCAGTCTAAGTTTAACGGAATACGTTCCAGTTTTCA
TTTCAAACGACGTCAACTCGCTTGAGAAAATCCTGCACACAACCTGGGAAGACCTCCAGG
TGATGAAAATAAATCGACTCGGCCACCAGAAAAAAATCATTCTTGCGATTACAAAGCTTA
ACCAACTGTGTAAAAGACAGCCAGAAAAATTTCAAAAAACTCCAACCCCTAGTAAAATCC
AACCCCCACACTACCAACAGTACTCCAACTTACCCCAAGAGCAACTACACCAGCGAGAAA
GCCCCCCGCAGCATTCCCCACCCCAACATTACCCCACTCCAGCCCCAAAGCCCCAACAAG
TCACCCCGATGTCTAAAAAGCCCCCCGTTCAAGCGAAACCGAAAAAGAACTTCTCCTCTT
TCAAGGAGAATCCTGGATTAAGCTTAGAGCTACAAAAAGCTCTCAGCAGAAGACAGAACA
TCATTGACAATGCCCCTCCATCACCAGAGCAACCAAACACTTTCCAAAAACCCCAGAAAC
CCCCAGTTAACGGCTCCCATCCACATCAACAGGGAAATGGCCCCAAACCCTCATTTTCTG
AACCCACTCATACACAACCCACCTACCCCACCCCGCCATTTAAACAACCAACATACACTC
CCCCCACCCATACACCCCCATCCCATTCACCCACCGATGTGGGAAAGTCCCATTTAACCC
GGGGTCCCCGACCAAGCCCCCCTCGTCGTACAACATCCATCAGCGAGGACCAAGAGGAGG
AGGAACAGAGGATCAACGTGAGATCCCTCGCAGCCAAAATGGATCCCATTCCTGCTGATA
CCAGAAAAATGTCTTCTGTTGCGAAGATCGTGAAGACGCCCACGTCTCCTGTTCATAAGA
GTGGAAACTTCTCTTTTACTCCAACATCCTTACATCAGTCATCTCCCCCATCATCTATTC
CTCCACAATCCTACCCCGCCCCAGCCCCCAAACCCTTAGTCACCCCTAAGCCCCAAGTAT
CCAAGAAACCTCCTGTTCAGAAAAAGCCGCCAACCCAGCCCCCCAAGCCGCACCCTATTG
CGCAAGAGCCCCCACAAGTGGCGGAAAAATCGAGAAAAATCTCGCACGGGGAACTAGGGA
AGCATTTTGACCTCAGTGTTCTTGATAACATTGATAAACAGAAGCAATCGGTTTTCCCGA
TCAAACCATCCAAACCAACCCCACCTGTCAATCATACGCCTCCACAGAGAGAACCCATGT
CAGCCCCATCACCCCAGGTATCGAACTCCGAGCCCACTTCCTCAAAACTTCACCCACCTC
CAATGGATCGGTACGACTCTTCATCAGATGAGTTTGAATGGCCTGCGCCCCCAGCTTTTG
AACCCCCACCCCCATTACCCTCCGCCATATCACCCCAAAACACCCCCGTCCAACCCCCAG
CCCTAATAGTCCAGCANNCCCCACCCCCAGCCATTAAGCCAAAACTGCCGCCTAAAACCT
CATCGAGACAAACCAAGCCCGAGCCTCCGCCCCCGAAACCCCCCCACCCACGTAATGACC
CAGTAGTGGAGACAGTCACGCCCCCAATTCCTGACGAAGTACTTATTACTGCTTTAACAG
ACGCAACAGACGACGCTCCAGAAAATAGCGAATCGAGACAGAATTTCTTGGACGACATTG
GCGTAATGTTTGACGACTTGGTCCTCGAATTTGACGAGATTCTTAAATAGTTAGTTTGAT
ATGAAGGTTCGAGGGTTATGCAAATGTTGGAAAGAGACGACTCGTATATTTTGGTGTTTC
TTGGGTTAAATATGGTCACCAATTCGGAGCCGCTTCTTAGAACGACAAAATGACTTAAAC
CGAGTTAGTATTACTCCATCGCCCTGAAATGCCGGCGAAATGATTAAATATTGCCATTGA
TTATTAGAGCAACTTTTGAATAAGAATTGTTGTAAAATATTCGAAAAATTTGGCCCTACA
CATTTTAAAAGGCAAGCGAGCAACGTTGTGTAAACATTGCCGTTAACCTTAGGATGAAAG
CGATCTATGATTTGTAAAGCGATTTCTTGAGTTTGGACGGATTTAACCGAAATCATTTTT
ATTTTATTTTTATCTTGTTAAATGGGCCGAAGATGTTTCATTGTGTTGTAGCTCCTCAGG
CAGCGTTAGTTGTCCCAACCATGATTAAGTCCTACTTCGCCCTAAATCATTGTGTTGCGA
ATTTTATTTTAATATTTTCCCTTTTTTTGCTGCGTGTTTGATTCGCCGAACGAATGCAAC
TACATTATCGGTAATTCATGAGGTTTCACCACCTGAATAAGCAGCAATAAAACGTGCGTG
CTTTGGTGTTCTTTATGCGTTGCATTATAAACAGCCTTTTCACCCAGCGTTATACGGTGT
CCCTAAATTTGCATTAAAAATCCCATTACCAGGCAACCAAACAATGTAAAATTTTATTAA
AGGTTAAATTTCGTTACACCGTATAAGCTACACCTCTTTTTAACTTTTTTTGCTCTTTCC
TTTTCGCTCCGGCAATTCTAACATCTTTGTACATGGTTACCTTTTAAACTGTACGCCACG
GGCCGCCCAAGCACTTTTAATTTTCGCTGTATCGTTTTTATTTTCGGCGCCTATAGTTCG
ACATCCACGGTATGCTACCATGTATGGTACACCCATGGTTCTACACATAAGGTACCTTAT
TATCGTGTACCGTCATCTAAATCACTTTGTACACTGGACCGGTTCAAAAAGAATAAATTT
TAAACCTGCTAAA
| SMART |
SAM (IPR001660) - T[142-208] 2.3E-10 - T[214-281] 5.9E-11 |
| CDD |
Caskin1/2_SAM_1 (IPR035497) - T[144-209] 4.45661E-33 |
| ProSiteProfiles |
SAM (IPR001660) - T[145-208] 14.272 - T[217-281] 10.809 |
| Pfam |
SAM (IPR001660) - T[147-206] 3.3E-12 - T[221-278] 2.1E-12 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[148-208] 6.68E-15 - T[219-281] 4.71E-14 |
| CDD |
Caskin1/2_SAM_2 (IPR035498) - T[213-283] 1.23467E-32 |
| PANTHER |
ANKS1 (IPR033635) - T[622-622] 2.2E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CSKI1_HUMAN | 42 % | 125 | 1.86E-29 |
| CSKI2_HUMAN | 35.329 % | 122 | 3.02E-28 |
