- Transcript 'KH2012:KH.C6.56.v2.A...' >
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- Transcript 'KH2012:KH.C5.213.v2....'
Transcript Model
Transcript Id
KH2012:KH.C5.213.v2.A.SL1-1
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
KhC5 [3,477,645 / 3,480,789]
Amino acid sequence
Length: 216
>KH.C5.213.v2.A.SL1-1
NMDSDKGLDDMSQKEKEKFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLT
ILRMAVSHMKQLRGAMGGGVENNYKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVYVS
DTVTAVLNQAHSDWNNHLLYDLVHPDDVEKVKEQLCISDTQNTGRILDLKTGTVKKEGQQ
SSVRMCMGSRRAFICRMRCGKSQINHMSSARHFRGM
Nucleotide sequence
Length: 950
>KH2012:KH.C5.213.v2.A.SL1-1
ATACTGTTTCCAATACAAGTCCTATGTACTAAAATCGGATATATATTATACCTCAAGTTT
ATAAATTTAAGTTGCTGAGGACGAGGCTTTTAATCATCTTGCTATATTACTGGTAACATT
TGAACCGCCACTAAAAGCATCTTATCTTACTTTAATTGCTGAAATATGGATTCTGACAAA
GGACTTGACGATATGTCGCAGAAGGAAAAGGAAAAGTTTGCGCGGGAAAACCACTCAGAA
ATTGAGAGGAGAAGACGGAATAAAATGACGGCTTATATAACTGAGTTGTCTGACATGGTG
CCCACATGCAGTGCACTTGCAAGGAAACCTGATAAGTTGACAATACTACGGATGGCTGTG
TCTCATATGAAGCAATTACGTGGAGCTATGGGTGGGGGTGTAGAAAACAATTATAAACCA
TCATTTCTAACTGACCAGGAGTTAAAACATCTTGTGCTTGAAGCTGCTGACGGTTTCTTA
TTTGTGACAGCATGCGATTCAAGTCAAGTTGTGTATGTTTCGGACACTGTAACAGCTGTT
CTTAACCAGGCACATTCTGATTGGAATAACCATCTTTTATATGATCTTGTACATCCTGAT
GATGTTGAAAAAGTAAAAGAACAACTATGTATATCTGATACACAGAATACAGGCCGAATA
CTTGATTTAAAGACAGGCACAGTGAAAAAGGAAGGCCAGCAAAGTTCAGTTCGTATGTGC
ATGGGGTCTAGACGTGCATTCATATGTAGAATGAGGTGTGGAAAGTCCCAGATCAATCAT
ATGTCTTCAGCACGTCATTTTCGGGGCATGTAAGTACATGCGTATTTATGGATGCCAAAC
CCGGGGCAGCAGAGTGGCATTTTTGTGCACTGCATTAATCAGTGAAAAGGACAACCAATA
AGTTGGTTGATTTCAAAGAAATGTTAATCTAATAAAACTATTCCTGCTTC
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[9-75] 1.8E-22 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[13-75] 3.66E-16 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[19-72] 17.142 |
| CDD |
bHLH_dom (IPR011598) - T[21-73] 9.87825E-14 |
| Pfam |
bHLH_dom (IPR011598) - T[21-72] 1.1E-15 |
| SMART |
bHLH_dom (IPR011598) - T[25-78] 8.9E-14 |
| PRINTS |
Nuc_translocat (IPR001067) - T[34-49] 2.6E-62 - T[54-74] 2.6E-62 - T[84-107] 2.6E-62 - T[109-128] 2.6E-62 - T[141-159] 2.6E-62 - T[187-200] 2.6E-62 |
| ProSiteProfiles |
PAS (IPR000014) - T[91-164] 10.329 |
| SMART |
PAS (IPR000014) - T[93-160] 0.0013 |
| Pfam |
PAS_fold (IPR013767) - T[97-199] 1.4E-8 |
| CDD |
PAS (IPR000014) - T[102-191] 9.51948E-7 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[103-157] 1.31E-10 - T[184-203] 1.31E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 73.399 % | 321 | 1.19E-105 |
| ARNT2_HUMAN | 72 % | 315 | 4.56E-104 |
| BMAL1_HUMAN | 50 % | 217 | 3.31E-67 |