- Transcript 'KH2012:KH.C9.252.v1....' >
- Transcript 'KH2012:KH.C1.19.v1.A...' >
- Transcript 'KH2012:KH.C4.152.v1....' >
- Transcript 'KH2012:KH.C5.213.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.213.v1.A.SL1-2
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
KhC5 [3,472,025 / 3,480,789]
Amino acid sequence
Length: 550
>KH.C5.213.v1.A.SL1-2
NMDSDKGLDDMSQKEKEKFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLT
ILRMAVSHMKQLRGAMGGGVENNYKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVYVS
DTVTAVLNQAHSDWNNHLLYDLVHPDDVEKVKEQLCISDTQNTGRILDLKTGTVKKEGQQ
SSVRMCMGSRRAFICRMRCGKSQINHMSSARHFRGMNTLGSPDDTKNRYAVTHVTGFIRS
WPPAGFGADGQGDNMDDVTMGGGGGGAGNYCLVAVARLQMTSHPTFNEVNSNQEDTEFVS
RHGCDGTFTFVDLRVSNVLGYQPQDLLMKLPSEFYHPDDVEHMKESFKQVIVMKGQVISM
MYRFRAQSGDYIWLRTSSFAFQNPYNNEIEYVVSTNTSIKQPTAEHQIEAMPEQKMIYNQ
PEPVPEVTQHHAQPYAIQEPSSVEMNYSPQNFSASSQQAWSHAPVATSQAEFHQQPVPER
FPANIGQVSVPYTGSPYENPTVPMYGTNPPLQAGREPYTQESMIPMVDPTNAAYAHNEYN
ISMFPPFSAP
Nucleotide sequence
Length: 2,772
>KH2012:KH.C5.213.v1.A.SL1-2
ATACTGTTTCCAATACAAGTCCTATGTACTAAAATCGGATATATATTATACCTCAAGTTT
ATAAATTTAAGTTGCTGAGGACGAGGCTTTTAATCATCTTGCTATATTACTGGTAACATT
TGAACCGCCACTAAAAGCATCTTATCTTACTTTAATTGCTGAAATATGGATTCTGACAAA
GGACTTGACGATATGTCGCAGAAGGAAAAGGAAAAGTTTGCGCGGGAAAACCACTCAGAA
ATTGAGAGGAGAAGACGGAATAAAATGACGGCTTATATAACTGAGTTGTCTGACATGGTG
CCCACATGCAGTGCACTTGCAAGGAAACCTGATAAGTTGACAATACTACGGATGGCTGTG
TCTCATATGAAGCAATTACGTGGAGCTATGGGTGGGGGTGTAGAAAACAATTATAAACCA
TCATTTCTAACTGACCAGGAGTTAAAACATCTTGTGCTTGAAGCTGCTGACGGTTTCTTA
TTTGTGACAGCATGCGATTCAAGTCAAGTTGTGTATGTTTCGGACACTGTAACAGCTGTT
CTTAACCAGGCACATTCTGATTGGAATAACCATCTTTTATATGATCTTGTACATCCTGAT
GATGTTGAAAAAGTAAAAGAACAACTATGTATATCTGATACACAGAATACAGGCCGAATA
CTTGATTTAAAGACAGGCACAGTGAAAAAGGAAGGCCAGCAAAGTTCAGTTCGTATGTGC
ATGGGGTCTAGACGTGCATTCATATGTAGAATGAGGTGTGGAAAGTCCCAGATCAATCAT
ATGTCTTCAGCACGTCATTTTCGGGGCATGAACACACTAGGATCACCAGACGACACTAAA
AACCGGTACGCAGTCACCCATGTAACCGGTTTCATCCGATCGTGGCCGCCTGCTGGGTTT
GGTGCCGATGGTCAAGGAGATAATATGGATGATGTAACAATGGGTGGAGGTGGTGGGGGG
GCGGGAAACTACTGTTTGGTTGCAGTGGCAAGATTACAGATGACCAGCCACCCCACATTT
AACGAGGTGAATTCAAACCAAGAGGATACAGAGTTTGTATCAAGACATGGGTGCGATGGA
ACTTTTACTTTTGTTGATCTTCGTGTGTCAAATGTACTTGGTTACCAACCACAGGATCTC
CTGATGAAACTTCCATCTGAGTTCTATCATCCTGATGACGTTGAACACATGAAAGAAAGT
TTCAAACAAGTTATTGTAATGAAGGGACAGGTAATATCCATGATGTACAGGTTCAGGGCC
CAATCAGGGGATTACATTTGGCTACGAACGAGTTCATTTGCTTTCCAGAATCCTTACAAT
AATGAAATTGAATATGTCGTCTCAACAAATACTTCAATCAAACAACCAACTGCTGAACAC
CAAATTGAAGCAATGCCCGAACAAAAGATGATTTACAATCAACCTGAACCTGTACCTGAA
GTCACACAACATCATGCTCAACCTTATGCTATACAAGAGCCTTCTTCAGTAGAGATGAAC
TACTCACCACAAAACTTCAGCGCAAGTAGTCAACAAGCATGGAGTCACGCACCGGTTGCA
ACTTCACAAGCAGAGTTTCACCAACAACCTGTACCTGAACGATTCCCCGCTAATATTGGC
CAAGTGAGTGTTCCATACACAGGGTCACCATATGAGAACCCCACAGTACCCATGTATGGA
ACGAACCCACCCCTGCAAGCAGGACGTGAACCATATACTCAAGAATCCATGATCCCAATG
GTAGATCCAACCAATGCAGCTTACGCACACAACGAGTACAATATTTCTATGTTTCCTCCA
TTTTCCGCTCCATAAAAAAAAAATTGAAAAAATATATTTTGAAGCAATTTCTGGATGCAG
TACTTTTTAATGGTTGACGCATAGGAAAAAATTTGCGTTATTTTTACATTTTACCCTGAT
TTTTATGAAATATTGTTGTTTTAAAGAGTATTGTAAATAAGAACTGCTCCAATGAACTGT
TCCATTTTATTTTAGCAGCTTTGCACTTTAGTATTGAAAACTTGAACTTTTAGCGTTGAA
AATTTGAACTTTTTTTAAATTTTAAATTGCCTGACACTAAATTGGATATAAAAGCCCATA
CTCTGCACTCAAATTTTGATTTTTAATTTACCTAGTACATTAAATGGTTGGGCTTCTTCC
AATAGCAAAACACACGGCTGGATTTCAGACTTAACCCATTAAAAACACCCCAGAATCTCG
TTAAATGAATTTAGGTTTACCAGAATGCCGATCTGATAGTTTAAGGCATTGTTTTTTTAT
TATTTTAGCGTATTATTTTCTGAGACACTTTAAGCGAAGCAGGCTATAATCAAACTAATT
GTTTTTTCATTTTAAACAACTACTGGTTCGAATTTTAATTTACAAACCCAGTCCTGTTTT
TAGAGTACATTAGTGCCTCTGTATATTGTATTTGATGATTTATGTGCAAACGGCCAATTT
AAAGCACATTGCACTTTCGCAAGCTTAAAATTGCTATTGTTCCCCAACCAAATTGCATTG
TGTTGAAAACTATGTACAAATATTGTGTTTTTTTGGCAGTGATAATAACTTTTTAATTTT
TCATATGCATTTTTTGTTTTATTCTAAATAAGTGATGTCCTATGCTTAGCAGTTGGGGAC
ACGAAATTCAGGCCAAAGTTGGCCTATTATCCTTTTTGTGTTGCTTATTTTTGTCTGGAT
AATCAGATATGTATATTGTGTCAAGAGATGTTTATACAGAACTATCATTGCCAATACCTT
CATAGTACAAGT
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[9-75] 8.3E-22 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[13-75] 1.7E-15 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[19-72] 17.142 |
| CDD |
bHLH_dom (IPR011598) - T[21-73] 3.85857E-15 |
| Pfam |
bHLH_dom (IPR011598) - T[21-72] 4.5E-15 |
| SMART |
bHLH_dom (IPR011598) - T[25-78] 8.9E-14 |
| PRINTS |
Nuc_translocat (IPR001067) - T[34-49] 1.3E-78 - T[54-74] 1.3E-78 - T[84-107] 1.3E-78 - T[109-128] 1.3E-78 - T[141-159] 1.3E-78 - T[187-200] 1.3E-78 - T[229-248] 1.3E-78 - T[297-314] 1.3E-78 |
| ProSiteProfiles |
PAS (IPR000014) - T[91-164] 10.329 - T[305-354] 12.743 |
| SMART |
PAS (IPR000014) - T[93-160] 0.0013 - T[284-352] 5.7E-5 |
| Pfam |
PAS_fold (IPR013767) - T[97-199] 9.2E-8 |
| CDD |
PAS (IPR000014) - T[102-191] 3.11393E-6 - T[297-394] 3.95608E-14 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[103-157] 3.35E-10 - T[184-203] 3.35E-10 - T[297-399] 1.51E-25 |
| TIGRFAM |
PAS (IPR000014) - T[305-392] 2.6E-7 |
| SMART |
PAC (IPR001610) - T[359-402] 2.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 59.453 % | 499 | 1.67E-169 |
| ARNT2_HUMAN | 59.95 % | 495 | 9.08E-169 |
| BMAL1_HUMAN | 42.752 % | 334 | 2.37E-107 |