- Transcript 'Cisavi.CG.ENS81.R15....' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C5.42.v1.A...' >
- Transcript 'KH2012:KH.C5.173.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.173.v1.R.ND1-1
Possible name(s)
BMP2; GDF5; GDF6
Gene model
Location
KhC5 [3,403,430 / 3,407,772]
Amino acid sequence
Length: 449
>KH.C5.173.v1.R.ND1-1
VSVSYRMAYLRFLIICLALCVFCLIGSTKCQSLSRREELLLKRCLDKSNVTRENRTLSSS
LKSRQCIRYLQELSAIESTAADQRDQNEVDPQANLFSYVSAITNWRNKEGSLGNLLLNRA
GSCHHHSKRMYHYWTDFFLARQTTSIVALAAQNRTWGAMHGKLLLRHSTARHLPANLVAA
ELVVVRKKPSVTREKFGKYKTLVTMREAGGRTRTLHAGYQSSCPHRESKFLMLNLDTRYI
TNWLAKRNSTNLLIFSQIIPRTRYGGTTETLLPVDVVQHIAGLVLHFQRPINSETYRLRS
SARLRQAVHASFPPTSTVRNRRKAAIRPRTRTRHQHVHRPEHRLPRRRKLTCSLEPFVVP
KSVTQNLNVTWPENGKRFWDISRCEGLCRHPIPAHISQTNHAIAINSHTTKGACCVPIRL
RAMDYIHLRNGELRTESLEELVALECGCR
Nucleotide sequence
Length: 1,446
>KH2012:KH.C5.173.v1.R.ND1-1
AATCAAAGTTGAATAAGTTTCAGTGTCATACAGAATGGCATATTTGCGTTTTTTAATTAT
TTGTCTCGCTTTATGTGTATTTTGTTTAATTGGTTCAACCAAATGTCAAAGCTTATCCAG
GAGAGAAGAACTTCTGTTAAAGAGATGTTTAGATAAAAGTAACGTCACGCGAGAAAATCG
TACATTATCAAGCTCTTTAAAATCAAGACAATGTATCCGTTACCTGCAGGAACTAAGTGC
TATTGAATCAACGGCAGCTGACCAACGCGACCAAAACGAAGTGGATCCGCAAGCGAACTT
GTTCAGTTACGTTTCAGCTATAACTAACTGGCGAAACAAAGAAGGGAGTCTTGGCAACTT
GCTACTGAACCGAGCAGGGTCGTGTCATCATCACTCTAAAAGAATGTACCATTATTGGAC
CGATTTCTTTCTCGCACGGCAAACCACGTCGATTGTGGCGCTTGCAGCACAGAATAGAAC
CTGGGGTGCAATGCATGGTAAATTGCTGCTACGTCATTCTACAGCAAGGCATTTACCAGC
AAACTTAGTTGCAGCCGAGTTGGTTGTGGTAAGGAAGAAACCTTCGGTAACTCGGGAAAA
ATTTGGAAAATATAAAACTCTGGTTACAATGAGAGAAGCGGGAGGTCGGACTCGTACATT
GCATGCAGGGTATCAGTCCTCCTGCCCACACAGAGAGAGTAAATTCCTCATGCTCAATCT
TGACACTCGGTATATTACAAATTGGCTTGCGAAAAGGAATTCAACAAATTTGTTAATATT
TTCGCAAATTATTCCACGAACAAGATACGGAGGCACCACAGAAACTCTTTTACCAGTTGA
CGTGGTGCAACACATAGCCGGTTTGGTGCTGCATTTTCAAAGGCCAATTAACTCTGAAAC
TTACCGGCTGCGCTCTTCCGCCCGTTTGCGGCAAGCAGTTCACGCAAGTTTCCCTCCAAC
TTCCACAGTCCGGAATCGACGTAAAGCTGCGATAAGGCCGCGTACTCGAACCCGTCACCA
ACACGTACATAGACCCGAACACAGATTACCAAGAAGAAGGAAACTTACCTGCAGTCTTGA
ACCATTTGTTGTACCTAAATCCGTTACCCAGAACTTAAATGTAACTTGGCCGGAGAACGG
AAAACGCTTCTGGGATATTTCAAGATGCGAGGGATTGTGTAGACATCCTATTCCTGCTCA
TATCAGCCAAACCAACCATGCAATTGCAATAAACTCGCACACCACTAAAGGAGCTTGTTG
TGTTCCAATACGACTAAGAGCTATGGATTACATTCATTTACGGAACGGAGAACTAAGAAC
CGAATCGCTGGAGGAATTAGTTGCGTTGGAATGTGGCTGTCGATGAGAACTGTACATTTT
CTTTACTTTACACGTTTCGTTGTTGTGTAAATATTATTAATTAATAAAAATAAATTGTAT
TACAAG
| PANTHER |
TGF-beta-rel (IPR015615) - T[9-449] 9.2E-40 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[331-449] 15.777 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[341-449] 1.6E-12 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[350-449] 2.75E-13 |
| Pfam |
TGF-b_C (IPR001839) - T[352-448] 2.4E-8 |
| SMART |
TGF-b_C (IPR001839) - T[379-449] 3.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|