- Transcript 'KH2012:KH.C5.141.v2....'
Transcript Model
Transcript Id
KH2012:KH.C5.141.v2.A.SL1-1
Possible name(s)
PAPD4; ZCCHC11; ZCCHC6
Gene model
Location
KhC5 [3,882,336 / 3,901,891]
Amino acid sequence
Length: 1,417
>KH.C5.141.v2.A.SL1-1
TCYGKDAVKMQPSQVNSEHSSLNSGAPRGKLTQAAKFQTKSSSPSSTKQTTPKCSNGGKN
KSMETSGSGKKADSMNGKWHVPKPGVGSVTCNLEEHLEATSNGRVYDKPNVAHEEANRNG
KMNAAYDNVKMNQQNQNPVNGKNKMIQHNETTKTVNTVHKEADDAKPTELGISAKIKKKR
NKKKPGNEILKLVNSGVNKNQNTPPTPSVDCSETPKIHQKKVVPSTPTISPGMEKLGLKQ
AEARLSRDYIFTLEKKSEDFPHAKFVCKLCNYHLDNVPLAHKHIKEKRHQKALKERQQDN
ILRELSLPSPPAINNLQKVLLTEVVAEVMSESDVQLRTNTVQDLEQLISTHIPKSRVVLY
GSSCSGFGFTSSDVNVDLQYPSTMRAPAALLKVLSLLQDSETYQDVNADFLGKNPRINFT
DQKSSLNISLSTGNESSILTSRLLRFYSLLDPRVIQLSMVFRKWAKMCRLDLQSEGSLPS
HAFIIMTIFFMQRHKYIPALHEVWLNLYTMKTIISKFQTDSDAETNTTLENCISESPDSN
IELDSPLSGAQEPVKPSPIQPNNPVNLMGGLEGKQLLVADLWLAMIKFFALEYPMEDQII
CICTSRTLLRSDKNWSRKRVAIVDPFSSKRNLCRSMTQQAVFGYMMSRLKAAVTYFYASR
AQNDTPQVSCGNHDVNDNTPSTSNGGTGLSQLYTFVYIYSIEEQLDEVVPKICDMAIHSV
LDEVAEDTTRYEFTNKVITGGHYPVKVCVLCKNEGHVRKDCPDEAKVMDLVELPPITKSL
LNALDRVCNYMYENFALRQKEVQERNKICEALMNYIQRKYNFKCQMNLFGSSRNGFGFRR
SDLDICMTFYGNATGEDLDFVSIITDVAKCLRRNSDLCNILPITTAKVPIVKFEHKMSGL
EGDISLYNLLAQKNTAMLSCYSSIDCRCKVLGYAMKVFVKRCQIGDASRGSLSSYAYTLM
VIFYLQQRKPPVLPVLQQLYEGSEQPVDTIDGWNAWFNSDVKALKDIWPEFGKNKESIGE
LWHNMLRFYTEEFDFRHHVVCIRKHEPLTVFEKEWTSKFISIEDPFDLNHNLGAGVSRKM
SNFIMRVFVKARQHFANLPPKNMDPIHEPEYFFDANILMDGEEAPNDRCCRVCGKIGHFV
RDCPRKKRRRGQDNGQQEVKDMNEYRCFLCGEFGHIKKDCPEYNNDSNFTGQNKFFRGSS
PRNSDFQQRNFQSPKYKMSPHQNNKRNNSHTPGSRDTRRSSPPPHPSHRSNETRAKMNLF
PPPAQERSIESSPRFVQSSPKQIPDKRRTPNKQWPSSPHTQQSPVYHQPPSASTQGYHGS
PYNVIPYNNGVYGGSPYNTGMPDHGKDPHRDQMGNGTQYLNNPAMVQGRNRNMAYSPMHP
LLSPMMNDGQQMSPGSRTPMGSSPHKQQRHHNRRNQK
Nucleotide sequence
Length: 4,708
>KH2012:KH.C5.141.v2.A.SL1-1
GACTTAATACTGTGTAGTCTGCTAAATACTATTGTATGCATGTGGAAATTATAGTAGTAT
AATTTGCACTAAACATGCTACGGGAAGGACGCGGTAAAAATGCAACCATCACAAGTCAAC
AGTGAACACAGTTCTCTAAATTCGGGTGCTCCTCGTGGGAAACTAACCCAAGCAGCAAAA
TTCCAAACCAAAAGTAGTTCACCATCTTCTACCAAGCAAACTACTCCGAAATGCTCAAAC
GGGGGAAAAAACAAATCAATGGAGACTTCTGGTAGTGGAAAGAAAGCGGATAGTATGAAT
GGTAAATGGCATGTCCCTAAACCTGGGGTTGGCAGTGTGACTTGTAACTTGGAAGAACAT
CTAGAAGCAACGAGTAATGGCAGGGTATATGATAAACCTAATGTGGCTCATGAAGAAGCT
AATAGAAATGGAAAGATGAATGCAGCATATGACAATGTTAAAATGAATCAACAAAATCAA
AATCCAGTAAATGGGAAAAACAAAATGATTCAGCATAATGAAACTACTAAGACAGTGAAC
ACAGTACACAAAGAAGCAGATGATGCTAAACCAACAGAACTGGGTATCAGTGCCAAAATC
AAGAAAAAAAGAAATAAGAAAAAGCCAGGTAATGAGATTCTGAAACTAGTGAACAGTGGT
GTAAATAAGAACCAAAACACTCCACCAACTCCAAGTGTGGATTGCTCTGAAACACCAAAA
ATCCATCAGAAGAAAGTGGTTCCATCTACACCCACCATTTCCCCTGGTATGGAAAAACTT
GGTTTGAAACAAGCAGAAGCTCGGCTTAGTAGAGATTATATATTTACACTGGAAAAGAAA
TCTGAAGACTTTCCCCATGCAAAGTTTGTATGTAAACTGTGCAACTATCACCTTGATAAT
GTACCTCTTGCACACAAGCACATTAAGGAGAAAAGGCATCAGAAGGCACTGAAGGAAAGA
CAGCAGGACAACATATTACGTGAGCTCTCCCTTCCTTCCCCCCCTGCCATCAACAACCTA
CAGAAGGTCTTACTTACTGAGGTAGTAGCTGAAGTAATGAGTGAAAGTGACGTACAACTA
CGCACTAACACAGTGCAAGACCTTGAACAACTTATCAGCACTCATATACCAAAGTCACGT
GTTGTGTTATATGGTTCATCATGCAGTGGGTTTGGTTTTACATCAAGTGATGTGAATGTT
GATCTACAATACCCATCCACCATGCGTGCTCCTGCTGCCTTGCTTAAAGTTCTTTCACTT
CTTCAAGATTCAGAGACTTACCAAGATGTGAATGCGGATTTTCTCGGAAAGAATCCTCGG
ATTAATTTCACGGATCAAAAATCATCACTTAACATCTCTTTAAGCACGGGGAACGAATCG
AGCATCCTGACAAGTCGTCTGCTACGTTTCTACTCCCTGCTTGACCCCAGAGTAATTCAG
TTAAGCATGGTGTTTCGTAAATGGGCAAAAATGTGTCGACTTGATCTACAAAGTGAGGGT
TCCCTACCATCCCATGCATTCATCATTATGACCATCTTCTTCATGCAAAGGCACAAATAT
ATACCAGCTCTACATGAGGTATGGCTAAATCTGTATACTATGAAAACAATTATTTCAAAA
TTTCAAACAGACTCGGACGCTGAAACAAACACGACACTCGAGAATTGCATATCTGAATCT
CCAGATAGCAATATTGAGCTTGATTCGCCACTATCAGGCGCTCAAGAGCCCGTCAAGCCG
TCCCCCATACAACCCAACAACCCTGTTAACCTTATGGGAGGGTTAGAGGGAAAACAATTG
CTTGTTGCTGATTTGTGGTTGGCCATGATAAAGTTCTTTGCATTGGAGTATCCTATGGAA
GACCAGATCATATGCATCTGCACAAGTCGAACCCTGCTTAGATCAGATAAGAATTGGAGC
AGAAAAAGGGTTGCAATTGTTGATCCTTTCTCTTCCAAGAGAAATCTATGTCGTTCTATG
ACTCAACAGGCAGTGTTTGGGTACATGATGTCCCGGTTAAAAGCAGCCGTGACTTACTTC
TATGCTTCACGTGCACAAAATGATACACCGCAAGTATCATGTGGCAATCATGATGTGAAT
GATAACACTCCATCTACTAGTAATGGTGGTACAGGTTTGTCTCAGTTGTATACGTTTGTT
TATATATATAGTATAGAGGAACAACTGGATGAAGTTGTTCCAAAAATTTGTGACATGGCA
ATCCACTCTGTGCTTGACGAAGTTGCTGAGGATACTACAAGGTATGAGTTTACTAATAAA
GTGATAACTGGTGGACACTACCCCGTCAAAGTTTGTGTCCTGTGCAAGAATGAGGGGCAT
GTTCGCAAGGATTGTCCCGATGAAGCTAAAGTTATGGACCTTGTGGAACTACCACCTATA
ACCAAGTCTCTACTAAATGCACTGGATCGTGTATGCAACTATATGTATGAAAACTTCGCA
TTGAGGCAGAAGGAAGTCCAGGAAAGAAACAAAATATGTGAAGCACTTATGAATTACATA
CAACGCAAATACAACTTCAAATGTCAGATGAATTTATTCGGTTCTTCAAGAAATGGTTTT
GGTTTTCGTCGTAGTGACCTTGATATTTGTATGACTTTCTATGGGAATGCTACAGGAGAG
GATTTAGACTTCGTGTCCATCATCACTGATGTTGCGAAGTGTCTTCGTAGGAATTCCGAT
CTTTGCAACATCCTCCCAATCACCACAGCTAAAGTCCCGATCGTAAAGTTCGAGCACAAG
ATGAGTGGCTTGGAGGGAGACATAAGTTTATACAACTTACTGGCACAAAAGAACACAGCT
ATGTTATCCTGTTATTCTTCCATTGATTGTCGATGCAAGGTGCTCGGGTATGCCATGAAA
GTTTTCGTGAAGCGGTGTCAGATTGGTGATGCTTCACGAGGCTCATTATCATCATATGCA
TACACACTCATGGTCATATTCTATCTGCAACAGAGGAAACCTCCAGTGCTGCCAGTTTTA
CAACAGTTATACGAAGGTAGTGAACAACCTGTAGATACAATAGATGGTTGGAATGCCTGG
TTCAACAGTGATGTCAAAGCTTTGAAAGATATCTGGCCCGAGTTTGGCAAGAACAAGGAA
TCCATCGGCGAGCTGTGGCACAATATGCTTCGCTTCTATACAGAGGAGTTTGACTTCAGA
CACCATGTTGTGTGTATAAGAAAGCATGAACCATTGACTGTGTTTGAAAAGGAATGGACT
TCCAAGTTTATTTCAATTGAAGATCCGTTTGATTTGAACCATAACCTTGGTGCTGGTGTA
TCGCGCAAGATGAGCAACTTTATCATGCGTGTGTTTGTGAAAGCAAGGCAACACTTTGCC
AACTTACCACCGAAAAATATGGATCCTATTCATGAACCTGAATATTTCTTCGATGCCAAC
ATCCTCATGGATGGAGAGGAAGCTCCCAATGACCGATGTTGCAGAGTTTGTGGGAAGATC
GGACACTTTGTACGAGACTGTCCCAGGAAGAAAAGAAGAAGAGGACAAGATAATGGGCAA
CAAGAAGTAAAGGATATGAATGAATACAGATGTTTCTTATGTGGAGAATTTGGACATATT
AAGAAAGATTGCCCAGAGTATAACAATGATAGTAACTTCACAGGACAAAACAAATTTTTC
CGTGGTTCTTCACCAAGAAACTCTGACTTTCAACAAAGGAACTTTCAATCTCCCAAATAC
AAGATGTCTCCTCACCAGAATAATAAGAGGAACAATTCCCATACACCTGGTAGCAGAGAC
ACAAGAAGAAGTAGCCCCCCACCCCACCCCAGCCATCGATCAAATGAAACTCGTGCAAAG
ATGAATCTATTTCCACCTCCTGCTCAGGAAAGATCGATCGAGAGCAGTCCACGTTTCGTG
CAATCATCACCAAAGCAAATTCCTGATAAGAGGCGGACACCAAACAAACAGTGGCCTTCC
TCCCCCCACACCCAGCAATCTCCTGTATACCACCAACCACCATCTGCATCTACACAAGGT
TACCATGGATCTCCATACAATGTGATTCCTTATAATAATGGAGTGTATGGTGGATCGCCA
TACAATACTGGGATGCCTGATCATGGTAAAGATCCTCACCGTGACCAGATGGGCAATGGA
ACACAATATCTCAACAACCCGGCAATGGTGCAGGGCAGAAACCGTAACATGGCATACAGT
CCTATGCACCCTCTACTATCGCCGATGATGAACGACGGTCAGCAGATGTCGCCCGGCAGC
CGTACCCCAATGGGGAGCTCTCCCCACAAGCAGCAAAGGCACCATAACCGTCGCAACCAG
AAATAAGACCCACGACAAGCGTCCTTTATCGTCTCGTAAAGTTTTATCCCCGCTTACATT
AGTGTTGTTTGGTGATTATTTTTTCATCACTTTTTAGGATGCAATTTAGCGCGCAACATT
TTCTTCGAACACCTTTGGTTTTATGTTTTCTTGTGGTTCTAGCTATCGTCTGCCACTTGT
TTTGCTTCCAAGACGTTTTATTCTTTTAAACTTTTAGCGCCGCACCCTGAGACGGGTAAG
CTTGAAATCTGAAAACAGATTTCTGTATTTTGTTTTAAAATAAATTGATTTAGACCAATG
TGGTTGCTGTTTATCAGCTGCAATAGGTTTCCATCCGGTTTTGTAAGCCAATATGATTTT
TTTGCAATATAAAACTGTGGTTGGCAAA
| Pfam |
PAP_assoc (IPR002058) - T[578-628] 7.5E-5 - T[1017-1070] 6.5E-14 |
| SMART |
Znf_CCHC (IPR001878) - T[747-763] 0.027 - T[1129-1145] 0.0061 - T[1166-1182] 4.4E-5 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[748-763] 8.812 - T[1130-1145] 9.851 - T[1166-1182] 10.576 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[1122-1184] 7.33E-9 |
| Pfam |
Znf_CCHC (IPR001878) - T[1129-1144] 0.001 - T[1167-1182] 9.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TUT4_HUMAN | 45 % | 528 | 3.04E-161 |
| TUT7_HUMAN | 57.212 % | 500 | 3.37E-152 |
| GLD2_HUMAN | 30 % | 141 | 2.16E-35 |
