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  1. Transcript 'KH2012:KH.C5.109.v8....'

Transcript Model

Transcript Id

KH2012:KH.C5.109.v8.A.SL4-1

Possible name(s)

AC113404.3; RAP1A; RAP1B

Location

KhC5 [2,178,219 / 2,184,578]

Sequences

Amino acid sequence

Length: 74

>KH.C5.109.v8.A.SL4-1
VPMILVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENAFFELVKQINSKQ
PPPVTKESCCCNIL

Nucleotide sequence

Length: 726

>KH2012:KH.C5.109.v8.A.SL4-1
GTTCCCATGATATTAGTTGGAAACAAATGCGATTTGGAAGACGAGAGGATTGTAACAAGA
GAGCAAGGGGAACTGTTATCTAGGCAGTGGCATTGCTCCTTCATGGAGACTTCAGCCAGG
ACCAAAATCAATGTTGAAAATGCATTCTTCGAATTAGTCAAACAAATCAATTCAAAACAA
CCACCCCCTGTAACCAAAGAAAGCTGTTGTTGCAATATTCTATAGAAATCTTTAGCATTA
TTCCCTGTGACGTCATAATGGAGTAGTATGACGCAAGAATCCCCCAACTCTGCTTGTATA
AAGAGCCCTCCTACAACGACCACAAAGGGTTATATTTTCGCCTCTTTATTTCCTATACGA
GCAAGTACGCATTTCCCTTTGCTGTTTTATTGCATATAACGTCGTTTAACCTTGCTGTTA
TCCAACCTAAGTAACTCTTTTTTTTCATCACTTTAAATTAACTCCTTCGCCTAGAAAATA
GTTTTAGAAAATCTCATATTTTCATTTGTAACCTTGAACCTAGTCGAATAACACAGCGTA
AGTTCTATTGCATTCTAATAGTGTTGCATTTTAACGCGTAGCGGTGCCACAACTGCTGCA
TTCTTCGCCTTAGATTTGGTTTCAAATTAGACGGTAGAATCTTTTAACCCACTCCTAAAA
TATGCTTTTAATTCCGAGTTGAATGTAACGATTTGTACATAAATAAATAAAGTACCGGCC
TTATAA

InterProScan

PANTHER
Small_GTPase_Ras (IPR020849) - T[1-73] 2.3E-25
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[1-62] 3.11E-17
Pfam
Small_GTPase (IPR001806) - T[1-57] 4.8E-17
ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[1-74] 15.339

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 61.644 % 96.7 3.03E-27
RAP1A_HUMAN 66.129 % 92.8 1.27E-25
RP1BL_HUMAN 61.644 % 96.7 3.45E-27