Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C5.109.v4....' > 
  2. Region 'REG00000043' > 
  3. Region 'REG00000037' > 
  4. Transcript 'KH2012:KH.C1.508.v2....' > 
  5. Transcript 'KH2012:KH.C5.109.v6....'

Transcript Model

Transcript Id

KH2012:KH.C5.109.v6.A.nonSL3-2

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

KH2012:KH.C5.109

Location

KhC5 [2,174,074 / 2,179,632]

Sequences

Amino acid sequence

Length: 175

>KH.C5.109.v6.A.nonSL3-2
FIFSDPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAEN
QQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDE
VPMILVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENVSIFLFQS

Nucleotide sequence

Length: 1,404

>KH2012:KH.C5.109.v6.A.nonSL3-2
GGACTGTTGTAAGTAGCTGTTGTATGTTAAGCGCCATAATTACACAAGAAAGAAAAGAGA
TTAATTTAAGGTTAGTAAGGTTAATTGAATGTTGAAACATTTGTATAATTTGGTACAAAC
CCCATTATTGATGTGGATGCCAATACGTTTAAGCTGTGCTGTGTGTAATGGGTTTTGTAA
TTAATTATTAGATATGGCTGTGCCGGTACAAGAGTATGATTTACTGTCACAGGATTCTGG
GTGTTTTTTTTCTTCAGTTTTTAAACAAAGCATTTTTCATGTCTGTTTGATTTAAGCTGT
TGGTGTAGTGGTTAAGAGGAACTTTTTATTTTTAAGGAACTGATACTTGTGGAGTTGTGG
TTAGTAGGCCCACTGTCTTCCTTTGTTGGTTCATAACAGCAATACTTGTGAATAAACCCT
TTACCATTCAGTCTGCGCAATATGACAATTCTTTATAAGATCTCAGCAAGCAAAATAGGA
AATAACACTTTTTACATATCTATTTTAAAACAGATTTGGTTCATTGACATTGTTTAAAAA
ATAACATGTACGACCAAGGCGTGCAAAACTAAAAGTTTGTAAAAAAAATTGCGCTACACC
GATCATACTCAGCAGACGGTTTAACAATTCTCTATTGAAAACCCTTTTCAAAAAGTTTAT
GTATATATATGTGTATATATAAATTTTTAAATATTGATTTATCTTTTCAGATCCCGGTGA
CAAAGGTCTAGTAATGAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGAA
AAGTGCACTGACAGTTCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCAT
TGAGGACAGCTATAGAAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTCT
TGATACTGCTGGAACGGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGCA
AGGGTTTGTGCTTGTGTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACTT
AAGGGAGCAGATATTAAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAAA
CAAATGCGATTTGGAAGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTAG
GCAGTGGCATTGCTCCTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATGT
GAGTATTTTTTTATTTCAGTCTTAACTTGTTTACATCTAAGTCAATTTCACTTTTTAATT
TTTTAAAAGCGCCAAACAAAATGTTTTTCAAGATTTTTATAGATTTTTATTATCTTTTTA
ACTATAACTTAAGATATTTTTGGTAGATGGTTTTTGTACAGCTAATGCATACATCCACAA
ATGTATAGTTTTCGATAAAAAAGT

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[11-175] 41.177
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[13-168] 1.7E-32
PANTHER
Small_GTPase_Ras (IPR020849) - T[13-168] 2.6E-91
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[14-172] 2.12E-51
Pfam
Small_GTPase (IPR001806) - T[17-168] 1.2E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 84.076 % 279 1.82E-97
RAP1A_HUMAN 83.439 % 276 3.78E-96
RP1BL_HUMAN 82.803 % 274 1.85E-95