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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L4.23.v1.A...' > 
  2. Transcript 'KH2012:KH.C5.109.v5....'

Transcript Model

Transcript Id

KH2012:KH.C5.109.v5.A.SL2-2

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

KH2012:KH.C5.109

Location

KhC5 [2,174,033 / 2,179,632]

Sequences

Amino acid sequence

Length: 171

>KH.C5.109.v5.A.SL2-2
DPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAENQQCM
LEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDEVPMI
LVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENVSIFLFQS

Nucleotide sequence

Length: 805

>KH2012:KH.C5.109.v5.A.SL2-2
ACCATTATAATTACAGAGCTTGTAGTTTTGTGTATACTGTTGGACTGTTGTAAGTAGCTG
TTGTATGTTAAGCGCCATAATTACACAAGAAAGAAAAGAGATTAATTTAAGATCCCGGTG
ACAAAGGTCTAGTAATGAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGA
AAAGTGCACTGACAGTTCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCA
TTGAGGACAGCTATAGAAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTC
TTGATACTGCTGGAACGGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGC
AAGGGTTTGTGCTTGTGTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACT
TAAGGGAGCAGATATTAAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAA
ACAAATGCGATTTGGAAGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTA
GGCAGTGGCATTGCTCCTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATG
TGAGTATTTTTTTATTTCAGTCTTAACTTGTTTACATCTAAGTCAATTTCACTTTTTAAT
TTTTTAAAAGCGCCAAACAAAATGTTTTTCAAGATTTTTATAGATTTTTATTATCTTTTT
AACTATAACTTAAGATATTTTTGGTAGATGGTTTTTGTACAGCTAATGCATACATCCACA
AATGTATAGTTTTCGATAAAAAAGT

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[7-171] 41.177
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[9-164] 1.5E-32
PANTHER
Small_GTPase_Ras (IPR020849) - T[9-164] 2.4E-91
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[10-168] 1.96E-51
Pfam
Small_GTPase (IPR001806) - T[13-164] 1.1E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 84.076 % 279 1.77E-97
RAP1A_HUMAN 83.439 % 276 3.33E-96
RP1BL_HUMAN 82.803 % 274 1.84E-95