Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.109.v5.A.SL1-2

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

KH2012:KH.C5.109

Location

KhC5 [2,174,049 / 2,179,632]

Sequences

Amino acid sequence

Length: 171

>KH.C5.109.v5.A.SL1-2
DPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAENQQCM
LEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDEVPMI
LVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENVSIFLFQS

Nucleotide sequence

Length: 789

>KH2012:KH.C5.109.v5.A.SL1-2
AGCTTGTAGTTTTGTGTATACTGTTGGACTGTTGTAAGTAGCTGTTGTATGTTAAGCGCC
ATAATTACACAAGAAAGAAAAGAGATTAATTTAAGATCCCGGTGACAAAGGTCTAGTAAT
GAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGAAAAGTGCACTGACAGT
TCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCATTGAGGACAGCTATAG
AAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTCTTGATACTGCTGGAAC
GGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGCAAGGGTTTGTGCTTGT
GTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACTTAAGGGAGCAGATATT
AAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAAACAAATGCGATTTGGA
AGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTAGGCAGTGGCATTGCTC
CTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATGTGAGTATTTTTTTATT
TCAGTCTTAACTTGTTTACATCTAAGTCAATTTCACTTTTTAATTTTTTAAAAGCGCCAA
ACAAAATGTTTTTCAAGATTTTTATAGATTTTTATTATCTTTTTAACTATAACTTAAGAT
ATTTTTGGTAGATGGTTTTTGTACAGCTAATGCATACATCCACAAATGTATAGTTTTCGA
TAAAAAAGT

InterProScan

ProSiteProfiles	Small_GTPase_Ras (IPR020849) - T[7-171] 41.177
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[9-164] 1.5E-32
PANTHER	Small_GTPase_Ras (IPR020849) - T[9-164] 2.4E-91
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[10-168] 1.96E-51
Pfam	Small_GTPase (IPR001806) - T[13-164] 1.1E-54

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAP1B_HUMAN	84.076 %	279	1.77E-97
RAP1A_HUMAN	83.439 %	276	3.33E-96
RP1BL_HUMAN	82.803 %	274	1.84E-95