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  1. Transcript 'KH2012:KH.C5.109.v3....'

Transcript Model

Transcript Id

KH2012:KH.C5.109.v3.A.SL1-1

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

KH2012:KH.C5.109

Location

KhC5 [2,174,049 / 2,184,578]

Sequences

Amino acid sequence

Length: 192

>KH.C5.109.v3.A.SL1-1
DPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAENQQCM
LEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDEVPMI
LVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENIFFDLVKQINRKTPEPK
KKKKKNSGCIVL

Nucleotide sequence

Length: 1,952

>KH2012:KH.C5.109.v3.A.SL1-1
AGCTTGTAGTTTTGTGTATACTGTTGGACTGTTGTAAGTAGCTGTTGTATGTTAAGCGCC
ATAATTACACAAGAAAGAAAAGAGATTAATTTAAGATCCCGGTGACAAAGGTCTAGTAAT
GAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGAAAAGTGCACTGACAGT
TCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCATTGAGGACAGCTATAG
AAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTCTTGATACTGCTGGAAC
GGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGCAAGGGTTTGTGCTTGT
GTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACTTAAGGGAGCAGATATT
AAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAAACAAATGCGATTTGGA
AGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTAGGCAGTGGCATTGCTC
CTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATATTTTTTTCGACCTAGT
GAAACAAATCAACCGAAAAACACCAGAACCTAAGAAGAAAAAGAAGAAAAACTCTGGTTG
TATTGTTTTGTAACCTTACCCTAACCAGCTCGGTGTCCTTACTTGTGATTGGTTAGTTCG
TCCCTTGTTTCCGCCAATCACGTTCGAACCGTCTAAACAACATCTCGTGACCGACGGTTC
CGCATCACCGAGCCATCCAATAAGCAAGCGACATCGTTTAGCACGAAGCAAGCATTGCTT
CACTTTTACCTTTTTTCATTTTTTCCATAGATTTGCTTTGAAACGGATGGGCTTTAGTTT
AATCATTATTTCGCAGTGTTTCGCTCTCACACCAGGGGAACCACCGCTACGTATCTAACA
CAACAATAACTAAACCCATAGTAAATAATTCTTCGTATTTATTATTTTGTGTTAAAACCG
CACCACCGACCGAATGACGTCATGAGTTGCCCGCACCAGTTTTTGTGTGCGTTACGTCAC
GAATAATTATGACGTCGCAAATGAACAGAATTGCATAATTTCAGCAATTACTCGTTTGGA
TTTAATTTTTCCGTTATAATTCGAATTGGTAAAATCTTCATATTTCGGCCCGGGCAATTC
GTAACAAAATATCCGCATGCGCTCATAAAGACACCGCTACCCTCCCCAACCCCCGACTGC
CATGGTGCTTAGGATGAACTGTGGTTCGCTTGGTGAATTAATTTATTTGTCGGATCGTGT
GAAACCTTTAATCGCATCTAATCTATTAAGCAGAAAGCGTAAAATCATTAACTTAATGAT
TTCGTCCGCATAACCCCTTCAACCTTCTATAGTTTGATCAGTGTTTTGTACATATACCTT
TGTGACGTCACACTTGACCATTTCCACCCATAGTGACGTCATAATGGAGTAGTATGACGC
AAGAATCCCCCAACTCTGCTTGTATAAAGAGCCCTCCTACAACGACCACAAAGGGTTATA
TTTTCGCCTCTTTATTTCCTATACGAGCAAGTACGCATTTCCCTTTGCTGTTTTATTGCA
TATAACGTCGTTTAACCTTGCTGTTATCCAACCTAAGTAACTCTTTTTTTTCATCACTTT
AAATTAACTCCTTCGCCTAGAAAATAGTTTTAGAAAATCTCATATTTTCATTTGTAACCT
TGAACCTAGTCGAATAACACAGCGTAAGTTCTATTGCATTCTAATAGTGTTGCATTTTAA
CGCGTAGCGGTGCCACAACTGCTGCATTCTTCGCCTTAGATTTGGTTTCAAATTAGACGG
TAGAATCTTTTAACCCACTCCTAAAATATGCTTTTAATTCCGAGTTGAATGTAACGATTT
GTACATAAATAAATAAAGTACCGGCCTTATAA

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[7-192] 45.031
PANTHER
Small_GTPase_Ras (IPR020849) - T[9-192] 2.2E-104
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[9-165] 8.1E-33
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[10-172] 4.4E-53
Pfam
Small_GTPase (IPR001806) - T[13-173] 2.1E-57

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 82.778 % 313 8.56E-111
RAP1A_HUMAN 84.118 % 301 6.79E-106
RP1BL_HUMAN 81.667 % 308 6.51E-109