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  1. Transcript 'KH2012:KH.L4.23.v1.A...' > 
  2. Transcript 'KH2012:KH.C5.109.v5....' > 
  3. Transcript 'KH2012:KH.L4.23.v1.R...' > 
  4. Molecular Tool 'Brachyury>Twist' > 
  5. Transcript 'KH2012:KH.C5.109.v2....'

Transcript Model

Transcript Id

KH2012:KH.C5.109.v2.A.SL1-1

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

KH2012:KH.C5.109

Location

KhC5 [2,174,049 / 2,184,578]

Sequences

Amino acid sequence

Length: 190

>KH.C5.109.v2.A.SL1-1
DPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAENQQCM
LEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDEVPMI
LVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENAFFELVKQINSKQPPPV
TKESCCCNIL

Nucleotide sequence

Length: 1,168

>KH2012:KH.C5.109.v2.A.SL1-1
AGCTTGTAGTTTTGTGTATACTGTTGGACTGTTGTAAGTAGCTGTTGTATGTTAAGCGCC
ATAATTACACAAGAAAGAAAAGAGATTAATTTAAGATCCCGGTGACAAAGGTCTAGTAAT
GAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGAAAAGTGCACTGACAGT
TCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCATTGAGGACAGCTATAG
AAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTCTTGATACTGCTGGAAC
GGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGCAAGGGTTTGTGCTTGT
GTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACTTAAGGGAGCAGATATT
AAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAAACAAATGCGATTTGGA
AGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTAGGCAGTGGCATTGCTC
CTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATGCATTCTTCGAATTAGT
CAAACAAATCAATTCAAAACAACCACCCCCTGTAACCAAAGAAAGCTGTTGTTGCAATAT
TCTATAGAAATCTTTAGCATTATTCCCTGTGACGTCATAATGGAGTAGTATGACGCAAGA
ATCCCCCAACTCTGCTTGTATAAAGAGCCCTCCTACAACGACCACAAAGGGTTATATTTT
CGCCTCTTTATTTCCTATACGAGCAAGTACGCATTTCCCTTTGCTGTTTTATTGCATATA
ACGTCGTTTAACCTTGCTGTTATCCAACCTAAGTAACTCTTTTTTTTCATCACTTTAAAT
TAACTCCTTCGCCTAGAAAATAGTTTTAGAAAATCTCATATTTTCATTTGTAACCTTGAA
CCTAGTCGAATAACACAGCGTAAGTTCTATTGCATTCTAATAGTGTTGCATTTTAACGCG
TAGCGGTGCCACAACTGCTGCATTCTTCGCCTTAGATTTGGTTTCAAATTAGACGGTAGA
ATCTTTTAACCCACTCCTAAAATATGCTTTTAATTCCGAGTTGAATGTAACGATTTGTAC
ATAAATAAATAAAGTACCGGCCTTATAA

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[7-190] 44.264
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[9-165] 7.4E-33
PANTHER
Small_GTPase_Ras (IPR020849) - T[9-181] 2.6E-97
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[10-172] 2.24E-53
Pfam
Small_GTPase (IPR001806) - T[13-173] 1.1E-57

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 79.558 % 299 3.66E-105
RAP1A_HUMAN 81.765 % 291 4.31E-102
RP1BL_HUMAN 78.453 % 294 3.74E-103