- Transcript 'KH2012:KH.C4.85.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.85.v2.A.SL2-1
Possible name(s)
POU2F1; POU2F2; POU2F3
Gene model
Location
KhC4 [1,749,401 / 1,753,524]
Amino acid sequence
Length: 477
>KH.C4.85.v2.A.SL2-1
TGNRLKKTNGLHEKSNSNLIFVPQSIVEQHNSGQNLSAHTTATQPIPPYLHHQRVNSETG
KRSYPEDDVLSIDNESEDQYQPSPDDINDLDMHRGHGYDLEEAKQLEQLELFAKDFKQKR
IKMGFTQGDVGQAMGCLYGNDFSQTTISRFEALNLSFKNMIKLKPMLERWLLDANNVLRE
SKDVVIPTPIQLDPISISRKRKKRTSIDAKKRTTLDKQFERNPKPSSEDLQAIAEECKME
KEVVRVWFCNRRQKQKRISQHEQQEMSPPDSPRNMVVPTTSYSVPWQFPSNEDEPSTSNN
IRRQPAKVNEISPIATVKSFTQPQIKQENHKSSMSSTPLPSLFPHQMLPSNPNQVSSTLL
ISSAAVTKSKEIFQAVSARDPKHNADTGLGAALPSHLLPQHTLDNMAYNPRLVQPNHSRL
QSKQSITSVPIPATTVLNSLFSFGNSFPMSSNVQQARMPTNCVNTAFTMNSKSSSES
Nucleotide sequence
Length: 1,684
>KH2012:KH.C4.85.v2.A.SL2-1
ACTGGCAACAGGCTCAAGAAAACCAACGGCCTTCATGAAAAGAGTAACTCGAATTTAATC
TTCGTACCTCAAAGTATAGTGGAACAGCATAATTCAGGTCAGAATCTCTCAGCGCATACA
ACCGCAACGCAACCGATTCCACCTTATCTACACCACCAACGTGTAAACTCAGAAACTGGT
AAACGTTCGTATCCAGAGGACGACGTGCTTTCCATCGATAACGAGAGTGAGGACCAATAC
CAACCTTCACCTGATGATATAAACGATCTGGATATGCACAGAGGACATGGATATGATTTG
GAAGAAGCAAAGCAGTTGGAGCAGCTGGAACTTTTCGCGAAGGATTTCAAGCAGAAGCGA
ATTAAGATGGGGTTTACTCAGGGTGATGTTGGACAAGCAATGGGTTGTCTGTATGGCAAT
GATTTCAGTCAAACCACCATTTCAAGATTTGAAGCACTGAACTTGAGCTTTAAAAATATG
ATCAAGCTGAAGCCCATGCTAGAAAGATGGTTGCTGGATGCTAATAATGTGCTACGAGAA
TCAAAAGACGTTGTTATTCCCACTCCAATCCAACTGGATCCCATTTCCATCAGCAGAAAA
AGAAAAAAGAGAACAAGCATTGATGCCAAGAAGCGGACTACTCTCGATAAACAATTTGAA
AGGAATCCTAAACCTTCATCAGAGGACCTGCAAGCTATTGCAGAGGAATGTAAAATGGAG
AAGGAGGTAGTTCGTGTTTGGTTTTGCAACCGACGGCAAAAGCAAAAGAGAATATCGCAG
CATGAACAACAGGAGATGTCTCCACCTGACTCACCAAGAAACATGGTTGTTCCCACCACC
AGCTACTCAGTGCCGTGGCAGTTTCCTAGCAATGAGGACGAACCTTCAACATCAAACAAC
ATTCGGAGACAACCTGCAAAGGTTAACGAAATCTCCCCCATCGCCACTGTCAAATCCTTC
ACTCAACCACAGATAAAGCAGGAGAATCACAAGTCCTCTATGTCCTCCACTCCTCTTCCA
TCTCTCTTTCCACATCAGATGCTCCCATCCAATCCCAACCAGGTATCATCAACACTTCTT
ATTTCATCAGCAGCAGTCACAAAATCTAAGGAGATTTTTCAAGCAGTATCCGCTCGTGAT
CCGAAGCATAACGCTGATACAGGTTTGGGTGCGGCGTTACCAAGCCATTTGTTACCACAG
CATACACTGGACAACATGGCCTACAATCCTAGGTTGGTCCAGCCAAATCACTCACGCCTA
CAATCTAAACAAAGCATTACCTCAGTGCCGATTCCCGCGACTACTGTATTAAATTCACTG
TTCAGTTTCGGCAACTCTTTTCCAATGAGCAGCAACGTTCAACAGGCAAGAATGCCAACC
AACTGTGTCAACACCGCTTTCACAATGAATTCGAAATCTAGCTCAGAAAGTTAACATTTT
TTGATGTGATTAAAAGTTCCAATTTTATTCTCCTAACTATAAGACACTTGAAACGTTTGC
AAGCAAGAAGCAGTGAGAAAACCAGTTTTTATATCTTTTCTAATTCATTTTGTGTTTCTT
GACATCAGCAATTGGTACCACTTGTTTATTTGGCAAGGTATTGCAATAGCAAATATTGAC
CTAATTTTCAATAATGAATTACCAGCAAAACGTATTTACCTGCCTCAACAGGAAATCTCA
TTGC
| SMART |
POU_dom (IPR000327) - T[101-175] 2.7E-44 |
| ProSiteProfiles |
POU_dom (IPR000327) - T[101-175] 48.625 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[104-174] 6.14E-26 |
| Pfam |
POU_dom (IPR000327) - T[105-174] 8.7E-34 |
| CDD |
Cro/C1-type_HTH (IPR001387) - T[113-163] 0.00131355 |
| PRINTS |
POU (IPR013847) - T[120-137] 1.4E-35 - T[143-156] 1.4E-35 - T[159-174] 1.4E-35 - T[199-219] 1.4E-35 - T[234-249] 1.4E-35 |
| ProSitePatterns |
POU_dom (IPR000327) - T[143-156] . |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[193-265] 3.64E-18 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[198-258] 17.232 |
| SMART |
Homeobox_dom (IPR001356) - T[200-262] 1.2E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[201-257] 5.7E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[201-257] 8.18731E-15 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[233-256] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO2F3_HUMAN | 60 % | 216 | 3.31E-65 |
| PO2F2_HUMAN | 60.92 % | 209 | 2.8E-62 |
| PO2F1_HUMAN | 63.125 % | 214 | 8.96E-62 |