- Clone 'ma157l11' >
- Transcript 'KH2012:KH.C14.414.v1...' >
- Transcript 'Cisavi.CG.ENS81.R11....' >
- EST 'AHC0AAA129YG11_RM1' >
- Transcript 'KH2012:KH.C4.85.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.85.v1.A.ND1-1
Possible name(s)
POU2F1; POU2F2; POU2F3
Gene model
Location
KhC4 [1,747,812 / 1,753,524]
Amino acid sequence
Length: 523
>KH.C4.85.v1.A.ND1-1
RIKCATAMSKATESATKERCAEGAINLSKNSRSSSVDSNNDVPEDLTGNRLKKTNGLHEK
SNSNLIFVPQSIVEQHNSGQNLSAHTTATQPIPPYLHHQRVNSETGKRSYPEDDVLSIDN
ESEDQYQPSPDDINDLDMHRGHGYDLEEAKQLEQLELFAKDFKQKRIKMGFTQGDVGQAM
GCLYGNDFSQTTISRFEALNLSFKNMIKLKPMLERWLLDANNVLRESKDVVIPTPIQLDP
ISISRKRKKRTSIDAKKRTTLDKQFERNPKPSSEDLQAIAEECKMEKEVVRVWFCNRRQK
QKRISQHEQQEMSPPDSPRNMVVPTTSYSVPWQFPSNEDEPSTSNNIRRQPAKVNEISPI
ATVKSFTQPQIKQENHKSSMSSTPLPSLFPHQMLPSNPNQVSSTLLISSAAVTKSKEIFQ
AVSARDPKHNADTGLGAALPSHLLPQHTLDNMAYNPRLVQPNHSRLQSKQSITSVPIPAT
TVLNSLFSFGNSFPMSSNVQQARMPTNCVNTAFTMNSKSSSES
Nucleotide sequence
Length: 1,919
>KH2012:KH.C4.85.v1.A.ND1-1
CCTTTTAGGGTTACAAGAATATATATTAATTTGTCTTAAGAGCTTTTATACTCTGAACCA
TAATATATGTGGATTGAATTTAAAACTCGGAACTTAAAGGATTAAATGTGCTACAGCGAT
GTCAAAAGCCACCGAATCTGCCACAAAAGAAAGATGTGCAGAAGGAGCAATCAATTTGTC
AAAGAATTCTCGGAGTTCATCAGTTGACAGCAACAATGATGTACCTGAGGACTTGACTGG
CAACAGGCTCAAGAAAACCAACGGCCTTCATGAAAAGAGTAACTCGAATTTAATCTTCGT
ACCTCAAAGTATAGTGGAACAGCATAATTCAGGTCAGAATCTCTCAGCGCATACAACCGC
AACGCAACCGATTCCACCTTATCTACACCACCAACGTGTAAACTCAGAAACTGGTAAACG
TTCGTATCCAGAGGACGACGTGCTTTCCATCGATAACGAGAGTGAGGACCAATACCAACC
TTCACCTGATGATATAAACGATCTGGATATGCACAGAGGACATGGATATGATTTGGAAGA
AGCAAAGCAGTTGGAGCAGCTGGAACTTTTCGCGAAGGATTTCAAGCAGAAGCGAATTAA
GATGGGGTTTACTCAGGGTGATGTTGGACAAGCAATGGGTTGTCTGTATGGCAATGATTT
CAGTCAAACCACCATTTCAAGATTTGAAGCACTGAACTTGAGCTTTAAAAATATGATCAA
GCTGAAGCCCATGCTAGAAAGATGGTTGCTGGATGCTAATAATGTGCTACGAGAATCAAA
AGACGTTGTTATTCCCACTCCAATCCAACTGGATCCCATTTCCATCAGCAGAAAAAGAAA
AAAGAGAACAAGCATTGATGCCAAGAAGCGGACTACTCTCGATAAACAATTTGAAAGGAA
TCCTAAACCTTCATCAGAGGACCTGCAAGCTATTGCAGAGGAATGTAAAATGGAGAAGGA
GGTAGTTCGTGTTTGGTTTTGCAACCGACGGCAAAAGCAAAAGAGAATATCGCAGCATGA
ACAACAGGAGATGTCTCCACCTGACTCACCAAGAAACATGGTTGTTCCCACCACCAGCTA
CTCAGTGCCGTGGCAGTTTCCTAGCAATGAGGACGAACCTTCAACATCAAACAACATTCG
GAGACAACCTGCAAAGGTTAACGAAATCTCCCCCATCGCCACTGTCAAATCCTTCACTCA
ACCACAGATAAAGCAGGAGAATCACAAGTCCTCTATGTCCTCCACTCCTCTTCCATCTCT
CTTTCCACATCAGATGCTCCCATCCAATCCCAACCAGGTATCATCAACACTTCTTATTTC
ATCAGCAGCAGTCACAAAATCTAAGGAGATTTTTCAAGCAGTATCCGCTCGTGATCCGAA
GCATAACGCTGATACAGGTTTGGGTGCGGCGTTACCAAGCCATTTGTTACCACAGCATAC
ACTGGACAACATGGCCTACAATCCTAGGTTGGTCCAGCCAAATCACTCACGCCTACAATC
TAAACAAAGCATTACCTCAGTGCCGATTCCCGCGACTACTGTATTAAATTCACTGTTCAG
TTTCGGCAACTCTTTTCCAATGAGCAGCAACGTTCAACAGGCAAGAATGCCAACCAACTG
TGTCAACACCGCTTTCACAATGAATTCGAAATCTAGCTCAGAAAGTTAACATTTTTTGAT
GTGATTAAAAGTTCCAATTTTATTCTCCTAACTATAAGACACTTGAAACGTTTGCAAGCA
AGAAGCAGTGAGAAAACCAGTTTTTATATCTTTTCTAATTCATTTTGTGTTTCTTGACAT
CAGCAATTGGTACCACTTGTTTATTTGGCAAGGTATTGCAATAGCAAATATTGACCTAAT
TTTCAATAATGAATTACCAGCAAAACGTATTTACCTGCCTCAACAGGAAATCTCATTGC
| SMART |
POU_dom (IPR000327) - T[147-221] 2.7E-44 |
| ProSiteProfiles |
POU_dom (IPR000327) - T[147-221] 48.625 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[150-220] 7.31E-26 |
| Pfam |
POU_dom (IPR000327) - T[151-220] 1.0E-33 |
| CDD |
Cro/C1-type_HTH (IPR001387) - T[159-209] 0.00144423 |
| PRINTS |
POU (IPR013847) - T[166-183] 2.1E-35 - T[189-202] 2.1E-35 - T[205-220] 2.1E-35 - T[245-265] 2.1E-35 - T[280-295] 2.1E-35 |
| ProSitePatterns |
POU_dom (IPR000327) - T[189-202] . |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[239-311] 4.19E-18 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[244-304] 17.232 |
| SMART |
Homeobox_dom (IPR001356) - T[246-308] 1.2E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[247-303] 6.5E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[247-303] 7.20592E-15 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[279-302] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO2F3_HUMAN | 60 % | 216 | 1.06E-64 |
| PO2F2_HUMAN | 58.73 % | 210 | 5.55E-62 |
| PO2F1_HUMAN | 63.125 % | 214 | 2.84E-61 |