- Transcript 'KH2012:KH.S891.1.v1....' >
- Transcript 'KH2012:KH.S1454.1.v3...' >
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- Transcript 'KH2012:KH.C4.804.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.804.v1.A.SL1-1
Possible name(s)
GJA8; GJC1; GJD2
Gene model
Location
KhC4 [5,174,655 / 5,180,626]
Amino acid sequence
Length: 414
>KH.C4.804.v1.A.SL1-1
ANMSWHFVERWLQKVNQHSTLIGKFWITFLIVFRIVVVSSVGDRVYSDEQSEFKCNSMQV
GCPNLCFNKFSPISHIRFWSFQIIMVTTPSIVFMVYSAHQIKKKPPNKEKSSVTGPTPSP
TKKAETAAEAIQLEEEDEKKKRKKSTMRPTSLANTNEQQDSRKLRQSVIQEMFGEEKAAF
SQHYVLYTSSVLMRTLVEILFIVLQYRLFGFRVSELYKCTGDPCPNIVDCFVSRPMEKTI
FLWFMFVIAVICLALNVGEMYYLLWQFGVRRSRLERKRKRYRRSTISEVRGANLADAEIL
DGGVFPVPGAPPPDYRGAMNYPDVDAIELVPTTGIAAGTTGLAMSFSLDDAMLPEHLNTS
RYPTGYGPTTSAGGSSRSNNNAYPVPVEVSADQPYMANPRNGVKGKPNDYYDYV
Nucleotide sequence
Length: 1,846
>KH2012:KH.C4.804.v1.A.SL1-1
ATTGATGGTTAGACGAAATACACTTGCATTTGCACAGTACAGGTTACCTTACCAACCCGA
ATACTACCAAGACGAATTTCTTAAATCCCGCGAGGAAATATTAAATACCTGAAGAACCCA
CATTCGAACAGAGCAGGAGACAGTTATATTCCAGCAGGGCAGAATTTTGAGCAAACATGT
CCTGGCACTTCGTAGAACGTTGGTTACAAAAGGTCAACCAACATTCGACCCTCATTGGAA
AGTTTTGGATCACTTTCCTTATCGTGTTTCGAATCGTGGTTGTGTCCAGTGTGGGTGATC
GTGTGTATTCGGACGAGCAAAGCGAGTTTAAATGTAATTCAATGCAGGTTGGGTGTCCAA
ATTTATGTTTCAACAAGTTTTCTCCGATATCCCACATTCGATTCTGGTCGTTTCAAATCA
TCATGGTGACTACGCCTTCAATCGTGTTCATGGTGTATTCGGCTCATCAGATAAAAAAGA
AACCGCCCAACAAGGAAAAATCTTCGGTCACTGGTCCCACCCCGTCACCGACCAAAAAAG
CAGAGACTGCTGCTGAAGCTATACAGCTCGAAGAGGAAGATGAGAAAAAGAAAAGAAAAA
AATCAACTATGCGGCCTACGTCACTGGCAAACACGAATGAACAGCAAGACTCCAGGAAAT
TACGTCAATCTGTAATCCAGGAGATGTTTGGGGAAGAAAAGGCGGCTTTTTCTCAGCATT
ATGTCCTCTATACTTCTTCCGTACTGATGAGAACTTTAGTGGAGATTCTATTTATTGTAC
TTCAGTATCGTCTCTTTGGATTCCGAGTATCAGAGCTCTACAAATGTACTGGCGACCCTT
GTCCCAACATAGTGGATTGTTTTGTATCCAGACCGATGGAGAAGACTATATTTCTTTGGT
TTATGTTTGTGATAGCCGTTATATGCCTTGCTCTAAACGTCGGTGAAATGTATTATCTCT
TATGGCAGTTCGGTGTTCGTCGTTCACGATTGGAGAGGAAACGAAAGCGTTATCGCCGCA
GCACAATCTCTGAAGTCAGAGGCGCCAATCTAGCAGACGCTGAAATTCTAGATGGCGGCG
TTTTTCCCGTCCCAGGGGCGCCACCACCCGACTACCGTGGAGCGATGAACTATCCAGACG
TGGACGCTATTGAGTTGGTCCCGACAACAGGCATTGCTGCTGGCACTACAGGCCTTGCGA
TGTCTTTTAGTTTAGACGACGCCATGTTGCCTGAACATTTGAACACCTCCAGGTACCCTA
CAGGTTACGGACCGACAACCAGCGCCGGAGGGTCATCAAGAAGCAACAACAACGCTTACC
CCGTACCCGTTGAAGTATCAGCGGACCAACCATACATGGCAAACCCGAGGAACGGCGTCA
AAGGGAAACCGAACGACTATTATGACTATGTTTGAACGTAGCATTAGCAAACACAATAAG
CGAAATAGAGTTCCGATATTTCCTATCACTGTATTAAACATAATCACTGAATGTAAGCAA
ATTGAGGATGTGATGATAAAACATCCTCTTGTTTACTGACAGCAACTCGTCTCCCACGTT
CTTCAAGTTCCACATATAATAAGAAGCAGAAGATTTAAGACATTTAAATATAAATCATAT
CACCGATGTACTATCTCGCTTATCATATATTTGAGGGCATTGTTATACAATGATGGAAGT
TATTGTGTCCATTTGTGCTCCAAATTACACGTACTGACACGAAGCTGTGTGTTTCTTAAA
AATTATTCCTAAGTTTTTTCCGGCGCCAATTTTTATTTAGATTTCATAAGTCCCAATGAA
GAATTTCAGCAAATGTAAATACAGCTTATTGTGAAAAGTAATACTA
| PANTHER |
Connexin (IPR000500) - T[3-333] 2.0E-113 |
| Pfam |
Connexin_N (IPR013092) - T[4-265] 9.8E-88 |
| PRINTS |
Connexin (IPR000500) - T[22-46] 1.9E-49 - T[53-75] 1.9E-49 - T[78-98] 1.9E-49 - T[183-209] 1.9E-49 - T[219-239] 1.9E-49 - T[240-263] 1.9E-49 |
| SMART |
Connexin_N (IPR013092) - T[44-77] 6.8E-12 |
| SMART |
Connexin_CCC (IPR019570) - T[197-263] 1.6E-41 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[219-235] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 36.207 % | 212 | 9.97E-65 |
| CXA8_HUMAN | 33.016 % | 189 | 1.49E-55 |
| CXD2_HUMAN | 34.385 % | 192 | 3.15E-58 |