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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'
  2. Molecular Tool 'cicl50g12-MO (Hamada's MO)'
  3. Transcript 'Harore.CG.MTP2014.S4...'
  4. Molecular Tool 'Noggin-MO (Lemaire Lab)'
  5. Transcript 'KH2012:KH.C4.57.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C4.57.v1.A.SL1-1

Possible name(s)

TNNT1; TNNT2; TNNT3

Location

KhC4 [5,218,632 / 5,221,861]

Sequences

Amino acid sequence

Length: 315

>KH.C4.57.v1.A.SL1-1
TFLPDLTVCSKMSDSEEYSSEEETSEEESGESSGEDGEEETGEIKRTSQEEEIETQEVEE
VEEEETTEEPEEQTQQATTPTPKLSIPKLIPPKIPDGELVDLEDIHRKRMEKDMVELQGL
INAHFEQRKKDEEEIEELRVRIEERKSKRAEQIRIRQDRERERMAQEREERKRKEEEEES
KRQEEEARKKAAIANMSLHYGGYLARAEKNKPNKRQTDREKKKKLLADRRKPLNIDHLSD
DKLKEKAQELWDNLYKLEEEKYDHEQRINRQKYDINQLRQRVNEYMGKFSKSKRNQPGKK
IAGHQGIGAAASNFK

Nucleotide sequence

Length: 1,169

>KH2012:KH.C4.57.v1.A.SL1-1
GTTATAACTTGATTAGACTTTCTTACCTGACTTGACCGTTTGCTCAAAAATGTCGGACTC
AGAAGAATACAGCAGCGAGGAAGAAACAAGCGAGGAGGAGAGTGGTGAATCCTCCGGTGA
AGACGGGGAGGAGGAAACGGGAGAAATAAAACGAACAAGCCAAGAGGAGGAGATCGAAAC
TCAAGAAGTCGAGGAAGTTGAAGAAGAAGAAACTACTGAAGAACCAGAAGAGCAAACCCA
GCAAGCGACAACACCGACACCAAAGCTCTCAATCCCAAAGTTGATCCCACCCAAGATCCC
TGATGGCGAACTTGTCGATCTTGAGGACATCCACCGCAAACGAATGGAGAAAGATATGGT
TGAACTGCAGGGGTTGATCAACGCTCACTTCGAGCAGAGGAAGAAAGACGAAGAGGAGAT
TGAGGAGCTCAGAGTGCGAATTGAGGAGCGAAAGAGCAAGAGAGCTGAACAGATCCGCAT
CCGACAGGATCGGGAACGAGAGAGAATGGCACAAGAAAGGGAAGAGCGAAAACGCAAAGA
AGAAGAAGAAGAGTCAAAGAGACAGGAAGAGGAAGCAAGAAAGAAGGCAGCGATCGCCAA
CATGTCTCTCCATTATGGTGGATACTTGGCTCGGGCTGAAAAGAACAAGCCAAACAAGCG
ACAAACCGACCGAGAAAAGAAGAAGAAGTTGTTGGCTGACCGAAGGAAGCCACTCAACAT
TGATCATCTTAGTGATGATAAACTCAAGGAGAAGGCTCAAGAATTGTGGGACAACTTGTA
CAAGCTTGAAGAAGAGAAATACGATCACGAGCAAAGAATTAACCGACAGAAATACGACAT
CAACCAGCTTCGCCAGCGTGTCAACGAGTACATGGGCAAGTTCTCGAAATCGAAACGTAA
CCAGCCAGGCAAGAAGATTGCTGGCCATCAAGGAATCGGTGCAGCCGCATCTAACTTCAA
GTGATCACCCTCCCAACCCATGCACGCTTTCACAAAACTTTAATTCTGTTGTGTTTGCTT
TACTGCTATGTTAAATACCAGTCGTCTAAACATTTTGACATAAATAGTCTTGAAGGAAAT
TGAAGTCAAATCTTGTTATAACTTTGTGAAGTCGTCTGACGTTTCTGTGATAGCGTTGGT
TTGAGCAAATACAATTCAATCTGGCAAAA

InterProScan

PANTHER
TNNT (IPR027707) - T[12-294] 9.8E-89
Pfam
Troponin (IPR001978) - T[108-244] 7.3E-26 - T[239-293] 1.1E-9
Gene3D
Troponin_sf (IPR038077) - T[196-304] 2.8E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TNNT3_HUMAN 52.294 % 194 9.31E-61
TNNT2_HUMAN 57.416 % 201 4.93E-63
TNNT1_HUMAN 51.121 % 171 7.97E-52