- Transcript 'KH2012:KH.L149.21.v1...' >
- Region 'REG00001220' >
- Transcript 'KH2012:KH.C4.547.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.547.v1.A.nonSL5-1
Possible name(s)
BMP2; BMP4; GDF5
Gene model
Location
KhC4 [1,882,107 / 1,884,355]
Amino acid sequence
Length: 500
>KH.C4.547.v1.A.nonSL5-1
AVESVGLKMHRILLAGLCLFVALHFVYAQWDSVGVETKLTVDPVKLKAVKSDKQAHSRLN
GFLTENFKNRESANEYGQFHISNREVYIKEQETEFQKLLRVNQISNIEAATFAGIDDDQP
SVIRALLEKPKSAAKGCNLPGQNGNVVRSLRNKGRILYQDGMNLLLQLRYHFGVLPDFEK
ITSAIIYAALPGGNDQKSKWWEAHSGLEYTFRVYAISQHNWNELNLKLRSALAPNDRFSS
NEFSDEIAHILGEEISNRTVTFNSEHATTDSTHPLDVLPILSQWRRDSVRHGTASACRYI
LMVTKKYQSEWSINSSENWAVSKWESFGSGQPRLLLVSIDSTQCTRAISETDDNRNDSKS
VAGKGSATSEVKKHSSRDTEQAASTRKRKTRMATRSTICQRHSMWVDFEEMGWSDWVIAP
RAFQSYRCAGECPFPLSGKLNGTNHAMLMTMMNSVDPSNTPMPCCVPTRLSSVSMLYLDK
KDNVVLRLYEDMVVEACGCR
Nucleotide sequence
Length: 1,665
>KH2012:KH.C4.547.v1.A.nonSL5-1
CTGAGCCGTTGAAAGTGTTGGGTTAAAGATGCATCGAATACTGCTAGCTGGTTTGTGTTT
ATTCGTGGCACTGCATTTCGTGTACGCGCAATGGGACTCTGTTGGTGTAGAGACTAAACT
CACAGTTGATCCAGTAAAACTTAAAGCTGTAAAGTCTGACAAGCAAGCCCATAGCCGTCT
GAATGGATTTCTGACTGAAAATTTTAAAAATCGTGAATCTGCAAATGAATACGGACAATT
TCACATCAGTAACAGAGAGGTGTATATAAAAGAACAAGAAACTGAGTTTCAAAAGCTACT
GAGAGTAAACCAGATATCAAATATCGAAGCTGCCACTTTTGCTGGAATCGATGATGATCA
ACCAAGTGTTATTCGTGCTTTGTTGGAAAAGCCAAAATCTGCAGCGAAAGGATGTAATCT
GCCTGGACAAAATGGCAACGTTGTACGGAGCCTTCGAAACAAAGGGCGGATTCTGTACCA
AGATGGGATGAATTTACTGCTACAGTTGCGTTACCACTTTGGTGTTCTGCCAGACTTCGA
AAAAATAACATCAGCAATTATTTACGCCGCATTACCGGGTGGAAATGACCAGAAATCAAA
GTGGTGGGAAGCACACAGTGGCCTCGAATACACTTTCCGTGTGTACGCAATCTCACAGCA
TAACTGGAACGAACTGAATTTAAAACTAAGAAGCGCATTAGCTCCAAACGATCGGTTTTC
AAGCAACGAATTTTCCGACGAAATTGCTCATATACTTGGTGAAGAAATTTCTAATAGAAC
TGTTACATTTAACAGTGAACACGCTACTACTGATTCAACACATCCTCTCGACGTTCTACC
GATTCTTAGCCAGTGGAGACGGGATTCAGTTCGCCATGGTACAGCATCGGCATGCAGATA
CATTCTTATGGTGACAAAAAAATATCAATCCGAATGGTCTATAAATTCCTCTGAAAACTG
GGCAGTTAGCAAGTGGGAAAGTTTCGGTTCAGGCCAGCCCAGGCTCTTACTTGTGTCCAT
AGACAGTACACAATGTACACGGGCGATATCCGAAACTGATGATAATAGAAACGACAGCAA
AAGCGTTGCCGGTAAAGGTAGCGCCACATCTGAAGTAAAAAAACACTCAAGCAGAGATAC
TGAACAGGCTGCCAGTACGCGTAAGCGTAAAACTCGTATGGCTACACGGAGCACTATTTG
CCAGCGACATTCAATGTGGGTGGACTTTGAAGAGATGGGTTGGTCAGATTGGGTCATAGC
TCCACGGGCGTTCCAGTCCTACAGATGCGCGGGGGAATGTCCTTTTCCATTAAGCGGCAA
ACTAAACGGTACCAACCATGCAATGTTAATGACAATGATGAATTCTGTAGATCCGTCTAA
CACCCCAATGCCTTGCTGTGTACCTACCCGGCTGAGTTCTGTATCTATGCTGTATTTGGA
TAAAAAGGACAACGTTGTGTTGCGCCTGTACGAAGATATGGTAGTAGAGGCTTGTGGCTG
CAGATGAACATTAAATTAAACCGAACTACTGTACGGAATTTTTGCTATAGAGTTATTTGA
CTTTTTGTGTTGCAGCACACGTAGATTTTATCGTTGCATTTTAAACCAAACGCGCCCACA
AAGGCTTTTACCTTTAAATTTAATAAAACGATGAATTATTAAGCA
| PANTHER |
TGF-beta-rel (IPR015615) - T[9-500] 2.4E-91 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[384-500] 6.6E-40 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[386-500] 40.795 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[394-500] 6.45E-39 |
| SMART |
TGF-b_C (IPR001839) - T[399-500] 3.2E-57 |
| Pfam |
TGF-b_C (IPR001839) - T[399-499] 1.7E-30 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[417-432] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP2_HUMAN | 48.837 % | 150 | 1.15E-40 |
| BMP4_HUMAN | 47.826 % | 151 | 7.16E-41 |
| GDF5_HUMAN | 45.205 % | 145 | 2.77E-38 |