- Transcript 'KH2012:KH.C4.539.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.539.v1.A.ND1-1
Possible name(s)
ERG; FEV; FLI1
Gene model
Location
KhC4 [1,086,024 / 1,093,023]
Amino acid sequence
Length: 717
>KH.C4.539.v1.A.ND1-1
SDPRNMLSSVNSVPEDFSVKSRRNVTELAESLTNEIKQEPGAIGEVVNGAFDLSTSGEQA
ADLRYHMYNGKRQDSPTSFIRSNPDPCLASGATHNGKHTPNLNENHNGQTDFGMTQHGAF
TSPGEDFVEDHAISSFLNSAEADPALPPSSEIQINCSNPRSQPPPPDFSPPVAEARSNEN
RTASSYLRTSPSIPTCDAQKQTSNLATTSAPVRVGQPQLSKVVRSSSFSNYQSMGSAFKP
AYQHSSYPHHNYPSNSPHYNHVPSPPERQGNSNNSPSSEHVDPNHPQHHGYQIPDANYDF
DGNFAGRRRQTPSLESNVSYQQRGLTGTPNVTEPNSQQGNGEAETKRVIVPADPLVWTEE
HVQEWVEWTITEYNLSDVDRSSFSNINGRALCEMTKEHFHRITSAKNADVFMSHLNYLRR
HTGPLPNLSSDDVEHIIQDGVYPYTGEPIPPIRTARNSFYNDPACPDVNPTAARHGSRYI
PSNYSGQPTETKGPRNAVPVTSPNIDPYQLFGPTSARLCNPGSGQIQLWQFLLELLSDPA
NAVCITWEGTNGEFKMVDPDDVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKR
YAYKFDFQGLAASLQPQPDQSSYSFGGDFKHPIYRHEMHFQAPGHAYPPMPHPAPPYHGQ
KHAYIPSPPARSPSYPGHPAASPGQYSWHPDMPAYPAVPTLASPHSNQPLPPTSFYN
Nucleotide sequence
Length: 3,478
>KH2012:KH.C4.539.v1.A.ND1-1
CACTGACTCTTAAAACTCTATAAGATGAATGCGTGACTTAGTTGTGACGGTGGTTTATTA
TATAAGAACGTTTCAGAAGCCATTTAATGCGTTAAGCACTCGCGTGTGTCAATTTGTATC
ATTGGCATTTTATTTGAAGGCGACCACCAATACACGAGAAAACACGTTGCATACTTTGGG
TCCTGAAGCGACCCCAGGAATATGTTGAGCAGCGTTAACTCAGTCCCAGAGGATTTCTCT
GTCAAGTCCCGGCGAAACGTAACTGAACTTGCAGAATCACTGACCAACGAAATCAAGCAA
GAACCAGGGGCCATCGGGGAGGTGGTGAACGGTGCTTTCGACTTGAGCACATCAGGGGAG
CAAGCAGCCGACCTCCGTTATCACATGTACAACGGAAAGAGACAAGACAGTCCCACATCG
TTCATCCGCAGCAACCCGGATCCTTGCCTTGCATCAGGTGCTACCCACAACGGCAAGCAC
ACCCCAAATCTGAACGAAAATCACAACGGTCAAACCGACTTCGGAATGACTCAACACGGT
GCGTTCACCAGTCCTGGTGAAGACTTTGTTGAAGATCACGCAATCTCTTCGTTTCTTAAC
AGCGCTGAGGCTGATCCAGCACTGCCACCTTCTTCAGAAATACAAATAAACTGCAGCAAT
CCACGGTCTCAACCACCGCCACCAGATTTTAGTCCACCAGTTGCGGAAGCTAGGTCAAAC
GAAAACAGAACCGCATCTTCATACCTGCGTACTTCACCCAGTATTCCAACATGTGACGCT
CAAAAACAGACGAGCAACCTGGCGACAACGAGCGCCCCAGTCCGAGTTGGACAACCACAA
CTTTCTAAAGTTGTTCGATCGAGTTCGTTTTCAAATTACCAATCAATGGGTTCTGCGTTC
AAACCTGCCTACCAACACAGCAGTTACCCACACCACAATTACCCTTCCAACTCCCCACAT
TACAATCATGTTCCAAGTCCACCTGAAAGACAAGGCAACTCCAACAACAGCCCATCATCC
GAGCACGTTGACCCAAATCACCCTCAACACCACGGCTACCAGATACCTGACGCCAACTAC
GACTTTGACGGCAATTTCGCTGGCCGGAGGCGCCAGACACCCTCTCTAGAATCGAACGTA
TCATATCAACAAAGGGGATTAACCGGTACACCAAATGTGACCGAACCAAACTCACAACAA
GGAAACGGGGAAGCAGAAACTAAACGAGTTATTGTACCAGCAGATCCACTAGTTTGGACG
GAGGAGCACGTACAAGAATGGGTCGAATGGACGATTACGGAGTACAATCTAAGTGACGTC
GATCGTTCCTCATTCAGCAATATCAACGGGCGAGCATTATGTGAGATGACAAAGGAGCAT
TTCCACCGAATAACCAGCGCGAAAAATGCTGACGTGTTCATGAGTCATTTGAATTACTTG
AGACGTCATACTGGACCTTTGCCCAACCTCAGTTCCGATGACGTGGAACACATTATTCAA
GATGGCGTCTACCCCTACACTGGTGAACCAATCCCACCAATCCGTACAGCTAGAAACAGC
TTCTATAATGATCCTGCATGTCCAGACGTGAACCCAACTGCCGCAAGACACGGCAGCAGA
TACATACCTTCCAATTATTCAGGACAACCAACCGAAACAAAGGGCCCAAGAAACGCAGTG
CCCGTTACGTCTCCCAATATAGATCCGTATCAACTTTTCGGACCGACCAGTGCAAGACTT
TGCAATCCTGGCAGTGGCCAGATTCAGCTTTGGCAGTTTCTTCTAGAACTGCTTAGCGAC
CCTGCAAACGCTGTGTGCATTACGTGGGAGGGAACAAACGGAGAATTCAAAATGGTGGAC
CCTGATGACGTAGCACGGCGTTGGGGAGAAAGAAAGAGCAAACCAAATATGAATTATGAC
AAGTTGAGCAGAGCTCTAAGGTACTATTATGACAAGAATATCATGACAAAAGTTCATGGA
AAGAGATACGCTTACAAGTTCGACTTTCAAGGTCTAGCAGCTTCACTGCAGCCACAACCG
GACCAATCGTCCTACTCATTCGGCGGCGACTTTAAACACCCGATCTACAGACATGAAATG
CATTTCCAAGCACCTGGCCATGCCTATCCACCGATGCCACATCCAGCGCCGCCCTACCAT
GGACAAAAACATGCCTACATTCCGTCTCCGCCTGCCCGTTCCCCTTCGTATCCAGGACAC
CCGGCCGCCAGTCCAGGACAGTATTCGTGGCATCCAGATATGCCAGCGTATCCTGCTGTA
CCGACTCTTGCCAGCCCACACTCTAATCAACCTTTGCCACCTACTTCCTTCTATAACTAG
AAATCAAATGAAGTGGGTAAATTTCTAATGCTTAACTTTGAAAAGTTCATATTTGCCTGG
ACACGGCGATGTACAAGAATTGAAAATTGGTGGTGGCTTCACTTCTTAGCTGCGTATCAG
TCAAGTGTTTGTTTAATTTATATGGGAAATTGAGACACCGCTGGCAACGATGTTGCTTCG
TAGTATGTGCTGTTTTTTGGTTATTATGCAAAACACCTGGTTTGCGTATCCGTTTTTACA
CTTTGACCCCATATATAAAGTTCTGCTATATGGAAACGCTTATAATGGACCTTAACATTT
TCTTTGCTAGTTTGAAACTACTTTAACGGGACAACTATCAGTTAAAATTACGTGCCAAGA
TATAAACGACTTGCAACAAATAGTGGTCGATCTATAACTGTTCTGGGTGCTTTAATTTTG
TTAATACTAGACTTCAAGTGTGTATGGTATCTATAGTGCTTCGAAGCTCATACTTTCAAA
CATCTATAACGTCTTGCGTGTTGTTGTGCAACACATTTTACCCGGAACGTTCATTTCTGA
TTTCACTAAAATAGCACAGCTGTGCTGTTTAAAGGTGTTTCTTTGACCTTTGTCGTATAC
CGTGTATATACTGTGTGTTTCAGCGTTTAAAACGAGCTTCCTTGACAATCTTTAACCTTG
ACTCATTATAACTATCTATAGTTTTCACTGAATGGGTCACACCGCTATAAGTATGCATAG
CCATACATTTCCATACGATAAAGGTGCACATACTTTCTTTTTTTACTTTTTATGGAAACT
TGCTAATTAAACTGAAACGACATTTTAAATTAAATTCTACCGCCTGCAACAACTATAAGT
GCCTGACAACTAATTTTCCAAATCCCCAAGAAATAACTGCCACCGGCAAAGCCTTTGAAC
TTTTAATTTAACCTGTTGTGCCTTTTCGAATTTTAAAGATTCATTCAAATAGTCTTGTGT
TGTTACCAATGAAGATAATCTTACGTTAAATTGTGTCGTACGTTACACCTAGCATTGTGC
AACCTACCGTAGAGTGCTTATTTAATGTCTTACATTGTAAGAGAGAGTTCGACTGTGGAA
TATTTTGTGTCAGTTTTACTGGGATTCAATTTATTAATAAAAGCTCACTTACCTCCGC
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[324-421] 1.8E-25 |
| ProSiteProfiles |
Pointed_dom (IPR003118) - T[336-422] 48.222 |
| SMART |
Pointed_dom (IPR003118) - T[338-422] 9.3E-22 |
| Pfam |
Pointed_dom (IPR003118) - T[342-420] 1.1E-22 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[515-620] 2.7E-47 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[523-666] 2.2E-48 |
| SMART |
Ets_dom (IPR000418) - T[525-610] 5.1E-57 |
| PRINTS |
Ets_dom (IPR000418) - T[526-539] 6.7E-30 - T[550-568] 6.7E-30 - T[569-587] 6.7E-30 - T[588-606] 6.7E-30 |
| ProSiteProfiles |
Ets_dom (IPR000418) - T[526-606] 47.031 |
| Pfam |
Ets_dom (IPR000418) - T[527-605] 9.5E-35 |
| ProSitePatterns |
Ets_dom (IPR000418) - T[528-536] . - T[572-587] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FLI1_HUMAN | 49.425 % | 314 | 6.16E-100 |
| ERG_HUMAN | 53.086 % | 327 | 1.49E-104 |
| FEV_HUMAN | 78.704 % | 182 | 5.65E-53 |
